PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz10g22030.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 958aa MW: 99095.4 Da PI: 6.5563

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz10g22030.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.2	1.1e-19	29	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde++v++vk++G + W++Ia+ ++ gR +kqc++rw+++l Cz10g22030.t1 29 KGSWTKEEDEQIVELVKKYGAKKWSLIASQLP-GRIGKQCRERWHNHL 75 799***************************.***********97 PP
2	Myb_DNA-binding	46.1	1.1e-14	81	125	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r WTteEde lv+++ G+ W++ a+ + gRt++ +k++w++ Cz10g22030.t1 81 RTDWTTEEDEHLVRLHMTIGNQ-WARLAQNLS-GRTDNAIKNHWNST 125 568***************99.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 958 aa Download sequence
MLAATYFQGR TDVQCLHRWQ KVLNPTLVKG SWTKEEDEQI VELVKKYGAK KWSLIASQLP 60 GRIGKQCRER WHNHLNPDIK RTDWTTEEDE HLVRLHMTIG NQWARLAQNL SGRTDNAIKN 120 HWNSTLKRRV EAGEFDHILE TIRRGSHAAA TVSGSEGSER YSGDHHRGSS RLQTAIAGKR 180 RSDLAGLSGC SVGDMAECGP TTKYARGLNG HHQAGVADPS ALSVPLMSSY DAAAAAAAAA 240 AAAANFQMSM GMLAARGVSV APPLFMKSPE KILRHQLGLQ FGRVRQNGDD EVQAAEALAS 300 LDAGRQYEGR PKRSAALRTA RYTDGMDTDD GVDVDNDQVN DAGRGGSKGG HHRGCHIDNG 360 HPNYHQRDKD VCDDSDLQDR DRDDERTAGD QAKHGFTQLG SYKLLNGSLP AAADIGNTHA 420 GFKQQPGYAA SRHRLVKASK TQQQELSSPA LTGLQSAPAE AVAATPAAAA LGGVESDEFA 480 SPPEQSDVLS GADAFKSPTW SGRSLSDASR LNVNGCTDGI VQLLRRGSAP SSFGMGAVTL 540 AAGLSVQDMN RVGAVWSNKP SGGAAACHQD PQSTSSDVLI VSHNTNLPMS HQDVITSAAA 600 CGVNTDCSPN ASPSTGGDLA LPAGLNLGTP YPLLYRHHSQ GDVVAAGVHP SGIVECMGAI 660 TSTLGPIQPL NTLPGMHILS SNVIGGSSTA AAFGGADAVA SSSAAPMHGP TPQGICVWGA 720 PVGMQLPTIG LAASADGSSP ASKQQVVDAS SGVALAAAAT PVVLVNGTGS PSSSEPAWTP 780 PPVPIMEYLR DINTTDMSSL LLSCCLGGTA VAPAASDSAG GGAGGAGGDG QVEQQPGSTG 840 PAVAESVECD QHSQGSPGVR CQACGNVTPM PIPGISHSMQ SVLEALANGE IDLQALVSVV 900 TAQGMPLYRL AEQVLQQAAA KAVAAKQAGS SVTKQRTESG VVSPIQGILQ HAMASTN*

Sequence ? help Back to Top

Protein Sequence Length: 958 aa Download sequence

MLAATYFQGR TDVQCLHRWQ KVLNPTLVKG SWTKEEDEQI VELVKKYGAK KWSLIASQLP  60
GRIGKQCRER WHNHLNPDIK RTDWTTEEDE HLVRLHMTIG NQWARLAQNL SGRTDNAIKN  120
HWNSTLKRRV EAGEFDHILE TIRRGSHAAA TVSGSEGSER YSGDHHRGSS RLQTAIAGKR  180
RSDLAGLSGC SVGDMAECGP TTKYARGLNG HHQAGVADPS ALSVPLMSSY DAAAAAAAAA  240
AAAANFQMSM GMLAARGVSV APPLFMKSPE KILRHQLGLQ FGRVRQNGDD EVQAAEALAS  300
LDAGRQYEGR PKRSAALRTA RYTDGMDTDD GVDVDNDQVN DAGRGGSKGG HHRGCHIDNG  360
HPNYHQRDKD VCDDSDLQDR DRDDERTAGD QAKHGFTQLG SYKLLNGSLP AAADIGNTHA  420
GFKQQPGYAA SRHRLVKASK TQQQELSSPA LTGLQSAPAE AVAATPAAAA LGGVESDEFA  480
SPPEQSDVLS GADAFKSPTW SGRSLSDASR LNVNGCTDGI VQLLRRGSAP SSFGMGAVTL  540
AAGLSVQDMN RVGAVWSNKP SGGAAACHQD PQSTSSDVLI VSHNTNLPMS HQDVITSAAA  600
CGVNTDCSPN ASPSTGGDLA LPAGLNLGTP YPLLYRHHSQ GDVVAAGVHP SGIVECMGAI  660
TSTLGPIQPL NTLPGMHILS SNVIGGSSTA AAFGGADAVA SSSAAPMHGP TPQGICVWGA  720
PVGMQLPTIG LAASADGSSP ASKQQVVDAS SGVALAAAAT PVVLVNGTGS PSSSEPAWTP  780
PPVPIMEYLR DINTTDMSSL LLSCCLGGTA VAPAASDSAG GGAGGAGGDG QVEQQPGSTG  840
PAVAESVECD QHSQGSPGVR CQACGNVTPM PIPGISHSMQ SVLEALANGE IDLQALVSVV  900
TAQGMPLYRL AEQVLQQAAA KAVAAKQAGS SVTKQRTESG VVSPIQGILQ HAMASTN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	2e-58	MYB family protein