PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz10g24240.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 770aa MW: 80875.9 Da PI: 4.7711

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz10g24240.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.2	4.4e-19	103	145	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT++Ede+l+++v+++G+++W+ Ia++++ gR +k+c++rw + Cz10g24240.t1 103 PWTPQEDEILKNLVAKHGPHNWSDIAKHLP-GRNGKSCRLRWVN 145 8***************************.*********88 PP
2	Myb_DNA-binding	53.7	4.6e-17	155	197	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEd +l++a+k++G++ W++Ia+ ++ gRt++ +k+rw++ Cz10g24240.t1 155 AFTDEEDRILLEAHKLYGNK-WTAIAKLLP-GRTDNAVKNRWHST 197 79****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MPCSYQLPDA SAKLWGSPWP RYSAHLQDIY RPINKDVMSR ELGGDPVGLP PMPAATSGAS 60 SSSALAVQSP SAQGGTTATP ASSVEPSSPL DEPPETRPSN YTPWTPQEDE ILKNLVAKHG 120 PHNWSDIAKH LPGRNGKSCR LRWVNQLRGD IKTEAFTDEE DRILLEAHKL YGNKWTAIAK 180 LLPGRTDNAV KNRWHSTLKR QVEKQEQEER ERQLLATLYA ASQSAITSHV QQPQQQQEGG 240 QRSGQVQPAQ APPQPPVPMV VTREKQEERE RQLIAALYAK GHYALALQLQ QQFALQHQQQ 300 GASQQPLLPH ERDQQLVAAL LAAGYPSLAS QLNQQLEQQR QHGQLPLGMA AASSSTSLPL 360 SVIPSSGPGP SASGIPSMAA SAPGAMSQTF PSQPPSHPQQ YAGLVPGDLS SFLSSPTNTL 420 QPQLLGMSLG FPQSQMQPTA IPSAAGGVSI SGPISSSSYG VPGSSALDQF VMQQIAAAAP 480 QGLLGSEQQQ QQQLLSSLHL PATGGYAVMP GMQDPGQMPQ YMSTGHPIPG LAPPTTTPIT 540 QQMAQPSASA PQTASQLYGV GGPMQQLGPG SYIPGLGREP GAFTLFESPE LPMITGRPTG 600 PQQGLQGQIK QEAMEQQQQQ QQHPAAGDSP TQAIKRLRAD LEGIPTSVGV TISPPPHHLG 660 SFIGSLPPSL PGSFLLGSVP GSLGQLLGGL SSQPGSALSL SDFFKIDDID APLAPPPGGS 720 EGWQGGMRGS GEAEGKDSDD DDDGDDGDDD DDNDDDDGDG GGAGPQAAG*

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MPCSYQLPDA SAKLWGSPWP RYSAHLQDIY RPINKDVMSR ELGGDPVGLP PMPAATSGAS  60
SSSALAVQSP SAQGGTTATP ASSVEPSSPL DEPPETRPSN YTPWTPQEDE ILKNLVAKHG  120
PHNWSDIAKH LPGRNGKSCR LRWVNQLRGD IKTEAFTDEE DRILLEAHKL YGNKWTAIAK  180
LLPGRTDNAV KNRWHSTLKR QVEKQEQEER ERQLLATLYA ASQSAITSHV QQPQQQQEGG  240
QRSGQVQPAQ APPQPPVPMV VTREKQEERE RQLIAALYAK GHYALALQLQ QQFALQHQQQ  300
GASQQPLLPH ERDQQLVAAL LAAGYPSLAS QLNQQLEQQR QHGQLPLGMA AASSSTSLPL  360
SVIPSSGPGP SASGIPSMAA SAPGAMSQTF PSQPPSHPQQ YAGLVPGDLS SFLSSPTNTL  420
QPQLLGMSLG FPQSQMQPTA IPSAAGGVSI SGPISSSSYG VPGSSALDQF VMQQIAAAAP  480
QGLLGSEQQQ QQQLLSSLHL PATGGYAVMP GMQDPGQMPQ YMSTGHPIPG LAPPTTTPIT  540
QQMAQPSASA PQTASQLYGV GGPMQQLGPG SYIPGLGREP GAFTLFESPE LPMITGRPTG  600
PQQGLQGQIK QEAMEQQQQQ QQHPAAGDSP TQAIKRLRAD LEGIPTSVGV TISPPPHHLG  660
SFIGSLPPSL PGSFLLGSVP GSLGQLLGGL SSQPGSALSL SDFFKIDDID APLAPPPGGS  720
EGWQGGMRGS GEAEGKDSDD DDDGDDGDDD DDNDDDDGDG GGAGPQAAG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-37	MYB family protein