PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz10g28030.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family NF-YC
Protein Properties Length: 141aa    MW: 15492.6 Da    PI: 6.8015
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz10g28030.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC57.43.3e-18491282099
          NF-YC  20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     lP+arikk++ka+ dvk ++a+a  l++++ elfi  +  rs  h ++ +r  l   d+ +av +    +fl divp++
  Cz10g28030.t1  49 VLPFARIKKMIKAEGDVKAVAADANFLIARSAELFIELMVSRSAEHMNQERRALLAYKDVCTAVHEWAPLEFLKDIVPKK 128
                    69**********************************99999*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MAEVERRHAA QAGDREHASA DDEQQENISP KDQAPGPSTH REREAHGLVL PFARIKKMIK  60
AEGDVKAVAA DANFLIARSA ELFIELMVSR SAEHMNQERR ALLAYKDVCT AVHEWAPLEF  120
LKDIVPKKAT AAALLAQNKS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.32e-14NF-YC family protein