PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz11g11240.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

Nin-like

Protein Properties

Length: 995aa MW: 106001 Da PI: 6.1025

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz11g11240.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	60.9	2.4e-19	870	917	4	51
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 i+ + l++ ++lpi++AA++Lg+++TvLK+ CR++ IkRWP+Rk ks Cz11g11240.t1 870 VITRNALREVYDLPINEAASQLGIGVTVLKKYCRKFDIKRWPYRKRKS 917 589999***************************************888 PP

Sequence ? help Back to Top
Protein Sequence Length: 995 aa Download sequence
MHQARPCCPA KASPAHESNK SAVSSEDIDA SNKAFDADLV REVEHLREVF GITGNDVIED 60 TLKVLGKCDE SWGPGTAIQR NGAVPYTPGS TSSASRVCQG SPQHILNTGT SLKRHLSATQ 120 DLNADLNAAQ TTANMVLDVI AAVEPATIPI AAAPSTAKQR RSMTCQQDGT CPGCVQVDGW 180 SAGDISLSAA HEDSLLSPLS GMSTVLCANA PVGNQDAQGA DILSLSTSKS NSNHISHREP 240 LVIAIPSDHM SADSDDPLLA GFTDLGQMTP SLQPLMQPMQ LYTCTAKPIT DQAEARARRM 300 ERKAIRQAKQ AYRARPLAAQ PAAVINPGSM QCQAEQRILP CSFAGDFNRE SHMPESGQKH 360 NDICNAVLAA AASVAAQLPA TCSKQRTHGK RAVNLNTAVT AYAKRMKDTG EDLTADQAHN 420 ILLVEQIEAH HPEWLTDPDH APPEVAECLD KLQQVWLMLQ QSQPCSVTCD NTDSAFNKPV 480 LDSVSAGDDS PCLPDIHCQA VRGRAMITAM KDFTARQQRR SQDGDGGLCG VLRTHQPGIP 540 DISCSVSETA SPPSSGHGSG CFAAEGKASD AVTNAAGAGD SGSSPEATTT AGNHVAGTVV 600 MQSPVSDTFA NMQMHAIHTN GMQDCNGKAA SSNGCSMDVV QLDPSNQVAS LVAEEHDPLL 660 LLPLQLPCST NLQQQAIHQH EQQQLPVQGE QQAPHGIATA QMPDDIAAHG VDAVVTVVRL 720 PRKRLQGGAG DKGGSPTENA PFPLSHTPLT TPIQQIDNPG LCPMMQTPTA PSVGPVAPHA 780 VPATSPPPPS LASSRPRRQV RRPKSWNDCT SDICCSSDDD GGGHGDDSTG CEGDEVDSDD 840 DDDAMDGSSD EDGNKRHSIR PHGKSTKARV ITRNALREVY DLPINEAASQ LGIGVTVLKK 900 YCRKFDIKRW PYRKRKSMLK LIHTVETYAK GSGNGLNCLP VLQELRSFLD MIWEDPNIDL 960 DVRIKKLRQV IFKQEYKARQ QGRRGGLFDV LAGH*

Sequence ? help Back to Top

Protein Sequence Length: 995 aa Download sequence

MHQARPCCPA KASPAHESNK SAVSSEDIDA SNKAFDADLV REVEHLREVF GITGNDVIED  60
TLKVLGKCDE SWGPGTAIQR NGAVPYTPGS TSSASRVCQG SPQHILNTGT SLKRHLSATQ  120
DLNADLNAAQ TTANMVLDVI AAVEPATIPI AAAPSTAKQR RSMTCQQDGT CPGCVQVDGW  180
SAGDISLSAA HEDSLLSPLS GMSTVLCANA PVGNQDAQGA DILSLSTSKS NSNHISHREP  240
LVIAIPSDHM SADSDDPLLA GFTDLGQMTP SLQPLMQPMQ LYTCTAKPIT DQAEARARRM  300
ERKAIRQAKQ AYRARPLAAQ PAAVINPGSM QCQAEQRILP CSFAGDFNRE SHMPESGQKH  360
NDICNAVLAA AASVAAQLPA TCSKQRTHGK RAVNLNTAVT AYAKRMKDTG EDLTADQAHN  420
ILLVEQIEAH HPEWLTDPDH APPEVAECLD KLQQVWLMLQ QSQPCSVTCD NTDSAFNKPV  480
LDSVSAGDDS PCLPDIHCQA VRGRAMITAM KDFTARQQRR SQDGDGGLCG VLRTHQPGIP  540
DISCSVSETA SPPSSGHGSG CFAAEGKASD AVTNAAGAGD SGSSPEATTT AGNHVAGTVV  600
MQSPVSDTFA NMQMHAIHTN GMQDCNGKAA SSNGCSMDVV QLDPSNQVAS LVAEEHDPLL  660
LLPLQLPCST NLQQQAIHQH EQQQLPVQGE QQAPHGIATA QMPDDIAAHG VDAVVTVVRL  720
PRKRLQGGAG DKGGSPTENA PFPLSHTPLT TPIQQIDNPG LCPMMQTPTA PSVGPVAPHA  780
VPATSPPPPS LASSRPRRQV RRPKSWNDCT SDICCSSDDD GGGHGDDSTG CEGDEVDSDD  840
DDDAMDGSSD EDGNKRHSIR PHGKSTKARV ITRNALREVY DLPINEAASQ LGIGVTVLKK  900
YCRKFDIKRW PYRKRKSMLK LIHTVETYAK GSGNGLNCLP VLQELRSFLD MIWEDPNIDL  960
DVRIKKLRQV IFKQEYKARQ QGRRGGLFDV LAGH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	4e-16	Nin-like family protein