PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz11g12210.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 916aa MW: 98767.6 Da PI: 6.3866

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz11g12210.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.2	1.6e-12	75	117	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g+W t E+ ll + + lG++ W +Iar+++ gRt++ +k++w+ Cz11g12210.t1 75 KGNWDTAEEILLCQWHSILGSH-WCKIARKLP-GRTENAIKNHWN 117 79******************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 916 aa Download sequence
MGRASRHRDE DDDDDTYVDS EDSDTDDEVE QISSSAANKA SGSSRVVKRW TLEEHRMLDH 60 LVRQHGSERR PNMKKGNWDT AEEILLCQWH SILGSHWCKI ARKLPGRTEN AIKNHWNATY 120 RSKGPIRRVT PLTVYVGKLR EDEDPAAAFL HTVSEFKDVG TLPTFKAPSK PASTAYATRA 180 ARAATSAVAV ASHLKPASAG ATAGLLMAGQ QSEAVRANVL DTFDSEPLPG HVISEPARIK 240 QDIQDTEILT HAAWGRQEQQ QLKVHIVQQQ QQHVHGGQSG VRLRSPNDSH DSASALSCMD 300 HEQMLLLPPP LWEHIPASLN GSPCTPHNPT PAVNSTPPGS LPLHMYRQCA HDLSSTTSSL 360 AEYDQDRVNP SRAGVVGLSR QQSLAMNDCA GLGCHPSLQA THSKQAYQRM PTRLEVCLSM 420 QKAAVEVLEH LHGVDGYVDN TQPWQDVSLH SQQHGRHSDA SNGHGSLPFE QQHNHNGQPM 480 LLHGGYQHDA MLVGEPGTGY AHTQQGCGTA TGQLHYAAGS QAQQPPPGYD HLPHTSQPPA 540 PNLPQHGSTN GGTFTSSQQH MQAVYRQPSG HYQDLDMHEL SRVRGGCDVQ PVLPPQHKDH 600 QQHGYHGDLM PKQQPGHHTN WASLQQPTTH AGSSSLPAGF DGFHASVDPT YAGMNMLHAN 660 AAPPTSSAMQ PSFEHAGGWS LHTLETSNKQ SSLPAHLNNQ TLHSQQPTDD SCYQTFATPG 720 TTTALSQHNS TRDLATAGYW ADVSLQLPAD ASALQQPTGR LMRAYTTAES VLWQHASGFA 780 TNGLLSDQSG PAAADRSAYG ALGVASNGYD AGLYRTMSAP VSKLRGGTVG TGNDTHHPTS 840 SPPDMHPPQA TPGASNPLQQ WADSPSGSDP IISTLLQDGG YGGLNDDITT CFDCQDIQDF 900 GPECIEALID SEGYC*

Sequence ? help Back to Top

Protein Sequence Length: 916 aa Download sequence

MGRASRHRDE DDDDDTYVDS EDSDTDDEVE QISSSAANKA SGSSRVVKRW TLEEHRMLDH  60
LVRQHGSERR PNMKKGNWDT AEEILLCQWH SILGSHWCKI ARKLPGRTEN AIKNHWNATY  120
RSKGPIRRVT PLTVYVGKLR EDEDPAAAFL HTVSEFKDVG TLPTFKAPSK PASTAYATRA  180
ARAATSAVAV ASHLKPASAG ATAGLLMAGQ QSEAVRANVL DTFDSEPLPG HVISEPARIK  240
QDIQDTEILT HAAWGRQEQQ QLKVHIVQQQ QQHVHGGQSG VRLRSPNDSH DSASALSCMD  300
HEQMLLLPPP LWEHIPASLN GSPCTPHNPT PAVNSTPPGS LPLHMYRQCA HDLSSTTSSL  360
AEYDQDRVNP SRAGVVGLSR QQSLAMNDCA GLGCHPSLQA THSKQAYQRM PTRLEVCLSM  420
QKAAVEVLEH LHGVDGYVDN TQPWQDVSLH SQQHGRHSDA SNGHGSLPFE QQHNHNGQPM  480
LLHGGYQHDA MLVGEPGTGY AHTQQGCGTA TGQLHYAAGS QAQQPPPGYD HLPHTSQPPA  540
PNLPQHGSTN GGTFTSSQQH MQAVYRQPSG HYQDLDMHEL SRVRGGCDVQ PVLPPQHKDH  600
QQHGYHGDLM PKQQPGHHTN WASLQQPTTH AGSSSLPAGF DGFHASVDPT YAGMNMLHAN  660
AAPPTSSAMQ PSFEHAGGWS LHTLETSNKQ SSLPAHLNNQ TLHSQQPTDD SCYQTFATPG  720
TTTALSQHNS TRDLATAGYW ADVSLQLPAD ASALQQPTGR LMRAYTTAES VLWQHASGFA  780
TNGLLSDQSG PAAADRSAYG ALGVASNGYD AGLYRTMSAP VSKLRGGTVG TGNDTHHPTS  840
SPPDMHPPQA TPGASNPLQQ WADSPSGSDP IISTLLQDGG YGGLNDDITT CFDCQDIQDF  900
GPECIEALID SEGYC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	3e-17	MYB family protein