PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz12g05110.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family MYB_related
Protein Properties Length: 463aa    MW: 48677.7 Da    PI: 4.5461
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz12g05110.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.1e-09302349147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqky 47 
                      + rWTte  e lv++v+++G   W+tI      +g+   qck++++++
    Cz12g05110.t1 302 KTRWTTEQIEALVEGVEKYGLSAWRTIVMDPRlQGKNNMQCKDKFRNL 349
                      579***************************99**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MPPRKKAAAA AAAAPDAADH EGGDDTRSAR SKRRQGAADT EAVTTEAGGH GGKRARGQDA  60
GSTEIQAAAG QSCLPIFDTE VQQEQQEEAG IVQQLAQAAG GGQELVAAGV MDTEGVDGAQ  120
PVTADGGDGG EGAAGDVGQA AAGGEDFQAA DPQRLALEGM RKADMQNMTY ARRQNHVVTI  180
GFTLDLPEEL ADLDLGDRTG IIEVPVTGDV QMLKRLFMYQ AHNKLLPSLQ SLYTEADELM  240
VEHKEDGSPM PLAHYGIAEG SKIKLKIEIP DELPDLPLID EALASAPYNT SASAAGRTPS  300
RKTRWTTEQI EALVEGVEKY GLSAWRTIVM DPRLQGKNNM QCKDKFRNLC LTIIQGRPER  360
GLTLPWQLKD RVRVLIEQEN AKERAQLANS QLDPNQQLGV LPTLTLNLPA SNLTTGLAGS  420
LAAAGVAAGQ LPGGFLPSAV PGTLPMTLPA SMAVPTSVTD MA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.11e-08MYB_related family protein