PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz13g11180.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 1059aa MW: 112473 Da PI: 6.516

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz13g11180.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	32	77	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eEd++l+d+v+++G+++W +a++m+ gRt k+c +rw+ + Cz13g11180.t1 32 RVAWTQEEDKQLADLVAKYGTHNWPDVAAEMP-GRTSKSCSLRWRCF 77 679***************************.*********977 PP
2	Myb_DNA-binding	34.4	5.1e-11	91	132	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +E +v++ k++G++ W++Ia+ ++ gR+ +++k++++ yl Cz13g11180.t1 91 SDWEIAVIVEGQKMYGNR-WTLIASLLP-GRCNNDIKNYYNLYL 132 7899999*********.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1059 aa Download sequence
MGTADASKDH RRSRSIPAAA TYSDPCSIYQ KRVAWTQEED KQLADLVAKY GTHNWPDVAA 60 EMPGRTSKSC SLRWRCFLNP DLKRPCDDPL SDWEIAVIVE GQKMYGNRWT LIASLLPGRC 120 NNDIKNYYNL YLKQQVPGGR VANRYLDKRM TLQDLLRDAP KEVIEEEKNA AAYQNNRVPI 180 HGLKPSNGSH SSHAPSYSSH TSSGSTLTLK TSHSTPQGSH GMAGLLSSIS TPMPAHHPSH 240 SNSHHPNGSG TPNFSKPSVN TCMPLPGPSQ RSGVITTGGP DAAIVGKGVV STRPPSIPVK 300 PNAPLPPPSS RTPDEIHPVG RAVNFSPPKP GLSTLSIKTN KLSPVPKPSG AVSTPAKRSH 360 SATSGSSDDF TQVADGLLQE AASAHLRAAH SMPHTAVRPS SAVHIPPLPT DIDFGPEGPL 420 ATLFDEDEEE FCTPRAGAGL KRHKSAPVNA LEALLDSCGS PSLLSTTPWD PLPGGISQAG 480 DMHPQAAALN PLAGQFADGI DMVLDELASS FDPNIRHTHM LPTDGRVAPG VNLGNAGMAC 540 SSDIAMSDGH HVSMQPQVQS TPRDPHSQQL PQQPSAGTHL PTNFTLDGIE QEGLQQLKLL 600 LSGAMQEMEK GVPEPRPAGG RVVQQRQNTD MWGVHGAAPQ PMVDSQQHIP SGQQQHIPHD 660 QPHYPPGVPH LQHGFMGNEL HMGLIGVGSI HGHDVGYPQG IFPPNEHNVM QLPNGQSYVN 720 PPHMAGMQMT HSLSSMQPQH SHGMNQGWPT GDMGDMDEFM HMALGVLEGG SGSQMGSGSP 780 QQSSCYGHSQ PDKPMHPVDN IDLFDMHHGQ GSSGMTSNPG TCYGQQNGAA LMHQQQPAPG 840 YGNITAPYMH DHTWVHPHDP SQGFHQTHGM PGPSCLVSQH SQHSGAPSMS MMHGAGVLLH 900 PHHMQGLHSQ TQSRSPFSAS QHSDAQGSPG AASATSQQPS AANSSQSPAA GPINQLAANP 960 PGQLPHAVNP HVMQGGMAPG SSNTDQGPIP NMALLSNCTP EASWDDDTGS QSLDLPSSQV 1020 DALLHEMLPS IDGHDEADDD GDLEKHLSLV AQQFQAIQ*

Sequence ? help Back to Top

Protein Sequence Length: 1059 aa Download sequence

MGTADASKDH RRSRSIPAAA TYSDPCSIYQ KRVAWTQEED KQLADLVAKY GTHNWPDVAA  60
EMPGRTSKSC SLRWRCFLNP DLKRPCDDPL SDWEIAVIVE GQKMYGNRWT LIASLLPGRC  120
NNDIKNYYNL YLKQQVPGGR VANRYLDKRM TLQDLLRDAP KEVIEEEKNA AAYQNNRVPI  180
HGLKPSNGSH SSHAPSYSSH TSSGSTLTLK TSHSTPQGSH GMAGLLSSIS TPMPAHHPSH  240
SNSHHPNGSG TPNFSKPSVN TCMPLPGPSQ RSGVITTGGP DAAIVGKGVV STRPPSIPVK  300
PNAPLPPPSS RTPDEIHPVG RAVNFSPPKP GLSTLSIKTN KLSPVPKPSG AVSTPAKRSH  360
SATSGSSDDF TQVADGLLQE AASAHLRAAH SMPHTAVRPS SAVHIPPLPT DIDFGPEGPL  420
ATLFDEDEEE FCTPRAGAGL KRHKSAPVNA LEALLDSCGS PSLLSTTPWD PLPGGISQAG  480
DMHPQAAALN PLAGQFADGI DMVLDELASS FDPNIRHTHM LPTDGRVAPG VNLGNAGMAC  540
SSDIAMSDGH HVSMQPQVQS TPRDPHSQQL PQQPSAGTHL PTNFTLDGIE QEGLQQLKLL  600
LSGAMQEMEK GVPEPRPAGG RVVQQRQNTD MWGVHGAAPQ PMVDSQQHIP SGQQQHIPHD  660
QPHYPPGVPH LQHGFMGNEL HMGLIGVGSI HGHDVGYPQG IFPPNEHNVM QLPNGQSYVN  720
PPHMAGMQMT HSLSSMQPQH SHGMNQGWPT GDMGDMDEFM HMALGVLEGG SGSQMGSGSP  780
QQSSCYGHSQ PDKPMHPVDN IDLFDMHHGQ GSSGMTSNPG TCYGQQNGAA LMHQQQPAPG  840
YGNITAPYMH DHTWVHPHDP SQGFHQTHGM PGPSCLVSQH SQHSGAPSMS MMHGAGVLLH  900
PHHMQGLHSQ TQSRSPFSAS QHSDAQGSPG AASATSQQPS AANSSQSPAA GPINQLAANP  960
PGQLPHAVNP HVMQGGMAPG SSNTDQGPIP NMALLSNCTP EASWDDDTGS QSLDLPSSQV  1020
DALLHEMLPS IDGHDEADDD GDLEKHLSLV AQQFQAIQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	9e-24	MYB family protein