PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz14g14020.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 685aa MW: 77462.7 Da PI: 6.2638

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz14g14020.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.6	4.3e-11	629	676	2	47
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 g W++e ++ lv++ kq+G++ +W++Ia+t++ g++ c r+ + Cz14g14020.t1 629 GEWSEEQELALVQGLKQFGKDlsdRWERIAATVP-GKSKARCMKRFKEL 676 79******************************.********9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MARTRTLLLG YDPSQLPNGT VVVCSMAGPV QVMHKEPAGV AFHMTVMKQQ GLIADPSAEE 60 SDTNDSATDT DSTVDPTRAS YSSLDAADMQ PPPGISWKKS KSKTKGVRKQ KELDYYQLLG 120 LQHERWTANE QQLKLAYRRT CLEFHPDKKL QGVEDPDEKQ QVEDYFKQIQ EAYETLSDPV 180 KRREYDSTDE FDDTLPTECD PADFFKVFAP AFRRNSRWSV DPAVPDVGDD TTPWEQVNAF 240 YNFWFVFKSW RDFPHPDEED IEQAESREHK RWMERINSKL REKGKKEEGK RLREFVDAAY 300 RFDPRVIRRK EEEKAERERK KREKEEAKLK AIQEEERIKA EAEAKQKAEQ EEKARVAAEA 360 KKAREAEKRL VKIERKRLRA LNDAGGGHHL IPEDDLERIC LTLDLSGLQQ LCEQVTADSL 420 DRQQQREILL DQLDGLDQRK QDQERAKEQQ KQVAAAALKD MGKRDHAKRV QEMTEWTDEE 480 LRLLDKAVKK FPQGTPKRWE QVAAYVRTRP LDEVLLMVKD RQGASSARMK AQEDWKGAAK 540 KRAEVTSAAD IRDHAFTDVQ IIVEAGPSSA AEAAPNGDST TSTTSSSTTA PPADASDASA 600 AANGTSTSGS SSGTAGTAAP KKVVSAESGE WSEEQELALV QGLKQFGKDL SDRWERIAAT 660 VPGKSKARCM KRFKELKEVF KGKK*

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MARTRTLLLG YDPSQLPNGT VVVCSMAGPV QVMHKEPAGV AFHMTVMKQQ GLIADPSAEE  60
SDTNDSATDT DSTVDPTRAS YSSLDAADMQ PPPGISWKKS KSKTKGVRKQ KELDYYQLLG  120
LQHERWTANE QQLKLAYRRT CLEFHPDKKL QGVEDPDEKQ QVEDYFKQIQ EAYETLSDPV  180
KRREYDSTDE FDDTLPTECD PADFFKVFAP AFRRNSRWSV DPAVPDVGDD TTPWEQVNAF  240
YNFWFVFKSW RDFPHPDEED IEQAESREHK RWMERINSKL REKGKKEEGK RLREFVDAAY  300
RFDPRVIRRK EEEKAERERK KREKEEAKLK AIQEEERIKA EAEAKQKAEQ EEKARVAAEA  360
KKAREAEKRL VKIERKRLRA LNDAGGGHHL IPEDDLERIC LTLDLSGLQQ LCEQVTADSL  420
DRQQQREILL DQLDGLDQRK QDQERAKEQQ KQVAAAALKD MGKRDHAKRV QEMTEWTDEE  480
LRLLDKAVKK FPQGTPKRWE QVAAYVRTRP LDEVLLMVKD RQGASSARMK AQEDWKGAAK  540
KRAEVTSAAD IRDHAFTDVQ IIVEAGPSSA AEAAPNGDST TSTTSSSTTA PPADASDASA  600
AANGTSTSGS SSGTAGTAAP KKVVSAESGE WSEEQELALV QGLKQFGKDL SDRWERIAAT  660
VPGKSKARCM KRFKELKEVF KGKK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	308	322	RRKEEEKAERERKKR
2	319	324	RKKREK
3	319	347	RKKREKEEAKLKAIQEEERIKAEAEAKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	2e-79	MYB family protein