PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz15g16100.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 2354aa MW: 247954 Da PI: 6.4379

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz15g16100.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.2	1.2e-10	1653	1697	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + WT++E e+++d ++++G + W + a ++ +tl q+k ++q+y+ Cz15g16100.t1 1653 QVWTADERERFLDTFRRYGRD-WGRLADAIP-SKTLVQIKTFYQNYK 1697 68***************77.*****.************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 2354 aa Download sequence
MLQKREWPPP IDKPSFVGRG GPFGGRRGRL DHPGGGFLDR PPLPLPNRPP FYGGGGRGPP 60 APPGPPRRAP PGPYSSGPDW PRPGPPLGDG WMGPGGYPGS REGFPVGRSN SPHEYSPRPA 120 WDKRSSDGMS APGPPRRDRD PGCVDMLASP CDWDRDKDWG RERDRDRERE REPRARSWER 180 DRDRGGRERD RDRERDRERE LERPGARLPV VDSRPPGIGA PSTSSSRAPR WSDELEAGEL 240 PAEQAVSPPT RSYRLDRADM SIKSPRMAGG REVPLHVSPR ASRDVPARPS HMPVSSLDPS 300 PATAGSSALS PAAAVQPSNM PSLPPGFRAQ RAAGSPSAAV KVAASPEELD HLYSPPTSDD 360 TPAGSPAELA AAAATTPVRA VAPHDPPRAA SVMLQPRLNG TLEQPKPLDR PVPLERPVPS 420 MQRWASNPMP SQPQQAASSA MPSHARNALP SRGSNGTVPP QSSSTLQHTP TSIISPQKQQ 480 QQDTTAAMHK SASLSSNLPI KLEPRRSMSG IPTLEIIDSK PTTTSIPSPF SVPHIKVTDI 540 GTAPSDLPSV GTSEDPAPKR RRIGFGMGLA RLGTAKLTTE PSKPLDSITP SDTAETPVAL 600 QSESSQQQQQ QQQQHGDAPD SVTQSMGIAQ PVSAVKDTVE APFEATTAAA MGGSTSGSIQ 660 PCSSTELQSP LDAAGQMRPL VDAASIPDVR LQPALGPVEP QANAASFETA QHMPAEQQHQ 720 HEDAVHAAFE PHAVAPVQGD FQADAAETPA ASADGQAAAA AQAAIGNDEH GMVIDSRPAE 780 TSFSAQPSSE VAQAHDQPAL SYAENAMNAS TSTPAGATKQ QQLTAAVTQG HTSTAGDIST 840 LAAASAAPAQ EALPPAAHSI THGTLDDRQI SAQAGPANLV PNTPLAMQNH LLQAVGFGDT 900 LLPVVLPSLG KDEISDAIER LEEQAAGLEA ELAALQQQQR QLVQDITAVD EALKDTDRDE 960 FTQAASAGSP RQQQQEDVLQ LPPAKRIKLD ISIRQQQQRQ QQQQQQEQEV ASDNEGSSGV 1020 RQDPEEFSEV VDTVVKEELA DQPSGELEQE QEQQQQQQQQ QPAKLRKARR KVQVGATAVP 1080 ADLWAFAEAF QAKDLQEQVQ FLDGNQAIAV AARTEFLKLL PDSMQMEAGE SIPTAKPLKP 1140 LYSGPSDWPR YADMQQQHEQ TAPAAKAYLQ QRHTLLRIKQ RTLAEHYKAG VASFEKYMRE 1200 IRSNQAKEAP PALPTAPLRT SRSGMHPSNA VRTEYEEVQL MSVFKAIEDL KNMTACPDMV 1260 LDPWVRRWQR FVSVNGLVAD PERDLQEDKT GKDWSTKERR IFMDRFLQHP KDFRAISSYL 1320 QNRSQAECIV FFYKHQKLDE FANVRRKQQL KKRRLQTETK RTLYGPHRIL PASARPEPTP 1380 VAAVGNRARG RSRGRARGRN RVTNDSVALD DGDEDGVYAG GEGFCSRGGD EVDVASLGIV 1440 GSHGFSDQQF MEAVRACGKD MGAISAHLGH VKGAGYVKWW FSRNKNRLGL EQIVKNREKH 1500 GYMAMARGVG LKAADDEDDA DREDMGMEGE DVAGVVQALA GMQGRLGEGL DLSRGRHGGI 1560 IGLEHVLHGL AHGSEGVAMN AASLLGIDPH APAAQALLAN LPMLPTLLSG GPSLFQSAME 1620 RARTSSPMGD GCQDNAAAGQ EEMLAAFSKR SGQVWTADER ERFLDTFRRY GRDWGRLADA 1680 IPSKTLVQIK TFYQNYKSKL GLDKLEAAAG VTHPRNRGGR PRLQLPRGSS GAMTDFGEDS 1740 LGPGGLPSGR LDTASSLKSL PGFRGALDDV ADGADYATSN AAGEGSFTGG SGPPGQQGGA 1800 DSTIEEQLRA AAAAAAAGVD QSLHGSLASR SAGDDRANMD LQALAAAAAA SLSQAHGREG 1860 INIMSLLQDG IFNTMPSGVD SERQLPGEEI KLFAGQKASG PSSSLPSLND LPAADRLLLG 1920 GAAYKPHQMA AARAAAAAAV AASAGFPLLS GYNAASLAHA GLPVRGLMGK LPGAGLLAAP 1980 DQGYLHPLAA QLGMYGLNQQ GPSADPVTAA VLSQLSNAAA LHAAGLNAHD PATVAALNPN 2040 LALQLAVAGA GAMPLDAAMA MALLAAQNAA HGGHHPVSAS MGHGGGSDTP AGAEAASHQH 2100 DDEAGNVHFS RGVNTAGLSA LPAAEAAAAA ASASDKAATS KAMARVPHSN AMGSQPMLTY 2160 AIEGFPHAMD IQQALKDAVA SINAHDISRA GGIASSMGPA LAWPPPAALQ GAAGALGTGF 2220 AVPAHAAAAL GAQAKQMPLL GAQLARLPHQ PGLTDALALL QANQMTGIPL HPSLLQVSSS 2280 QVLAGADVLP PQMLGIAVRP NLAAAGAPAW AGGQLNVPLE LLQQLDANAA RLAALQQLHQ 2340 AQQPPKEGPA GSK*

Sequence ? help Back to Top

Protein Sequence Length: 2354 aa Download sequence

MLQKREWPPP IDKPSFVGRG GPFGGRRGRL DHPGGGFLDR PPLPLPNRPP FYGGGGRGPP  60
APPGPPRRAP PGPYSSGPDW PRPGPPLGDG WMGPGGYPGS REGFPVGRSN SPHEYSPRPA  120
WDKRSSDGMS APGPPRRDRD PGCVDMLASP CDWDRDKDWG RERDRDRERE REPRARSWER  180
DRDRGGRERD RDRERDRERE LERPGARLPV VDSRPPGIGA PSTSSSRAPR WSDELEAGEL  240
PAEQAVSPPT RSYRLDRADM SIKSPRMAGG REVPLHVSPR ASRDVPARPS HMPVSSLDPS  300
PATAGSSALS PAAAVQPSNM PSLPPGFRAQ RAAGSPSAAV KVAASPEELD HLYSPPTSDD  360
TPAGSPAELA AAAATTPVRA VAPHDPPRAA SVMLQPRLNG TLEQPKPLDR PVPLERPVPS  420
MQRWASNPMP SQPQQAASSA MPSHARNALP SRGSNGTVPP QSSSTLQHTP TSIISPQKQQ  480
QQDTTAAMHK SASLSSNLPI KLEPRRSMSG IPTLEIIDSK PTTTSIPSPF SVPHIKVTDI  540
GTAPSDLPSV GTSEDPAPKR RRIGFGMGLA RLGTAKLTTE PSKPLDSITP SDTAETPVAL  600
QSESSQQQQQ QQQQHGDAPD SVTQSMGIAQ PVSAVKDTVE APFEATTAAA MGGSTSGSIQ  660
PCSSTELQSP LDAAGQMRPL VDAASIPDVR LQPALGPVEP QANAASFETA QHMPAEQQHQ  720
HEDAVHAAFE PHAVAPVQGD FQADAAETPA ASADGQAAAA AQAAIGNDEH GMVIDSRPAE  780
TSFSAQPSSE VAQAHDQPAL SYAENAMNAS TSTPAGATKQ QQLTAAVTQG HTSTAGDIST  840
LAAASAAPAQ EALPPAAHSI THGTLDDRQI SAQAGPANLV PNTPLAMQNH LLQAVGFGDT  900
LLPVVLPSLG KDEISDAIER LEEQAAGLEA ELAALQQQQR QLVQDITAVD EALKDTDRDE  960
FTQAASAGSP RQQQQEDVLQ LPPAKRIKLD ISIRQQQQRQ QQQQQQEQEV ASDNEGSSGV  1020
RQDPEEFSEV VDTVVKEELA DQPSGELEQE QEQQQQQQQQ QPAKLRKARR KVQVGATAVP  1080
ADLWAFAEAF QAKDLQEQVQ FLDGNQAIAV AARTEFLKLL PDSMQMEAGE SIPTAKPLKP  1140
LYSGPSDWPR YADMQQQHEQ TAPAAKAYLQ QRHTLLRIKQ RTLAEHYKAG VASFEKYMRE  1200
IRSNQAKEAP PALPTAPLRT SRSGMHPSNA VRTEYEEVQL MSVFKAIEDL KNMTACPDMV  1260
LDPWVRRWQR FVSVNGLVAD PERDLQEDKT GKDWSTKERR IFMDRFLQHP KDFRAISSYL  1320
QNRSQAECIV FFYKHQKLDE FANVRRKQQL KKRRLQTETK RTLYGPHRIL PASARPEPTP  1380
VAAVGNRARG RSRGRARGRN RVTNDSVALD DGDEDGVYAG GEGFCSRGGD EVDVASLGIV  1440
GSHGFSDQQF MEAVRACGKD MGAISAHLGH VKGAGYVKWW FSRNKNRLGL EQIVKNREKH  1500
GYMAMARGVG LKAADDEDDA DREDMGMEGE DVAGVVQALA GMQGRLGEGL DLSRGRHGGI  1560
IGLEHVLHGL AHGSEGVAMN AASLLGIDPH APAAQALLAN LPMLPTLLSG GPSLFQSAME  1620
RARTSSPMGD GCQDNAAAGQ EEMLAAFSKR SGQVWTADER ERFLDTFRRY GRDWGRLADA  1680
IPSKTLVQIK TFYQNYKSKL GLDKLEAAAG VTHPRNRGGR PRLQLPRGSS GAMTDFGEDS  1740
LGPGGLPSGR LDTASSLKSL PGFRGALDDV ADGADYATSN AAGEGSFTGG SGPPGQQGGA  1800
DSTIEEQLRA AAAAAAAGVD QSLHGSLASR SAGDDRANMD LQALAAAAAA SLSQAHGREG  1860
INIMSLLQDG IFNTMPSGVD SERQLPGEEI KLFAGQKASG PSSSLPSLND LPAADRLLLG  1920
GAAYKPHQMA AARAAAAAAV AASAGFPLLS GYNAASLAHA GLPVRGLMGK LPGAGLLAAP  1980
DQGYLHPLAA QLGMYGLNQQ GPSADPVTAA VLSQLSNAAA LHAAGLNAHD PATVAALNPN  2040
LALQLAVAGA GAMPLDAAMA MALLAAQNAA HGGHHPVSAS MGHGGGSDTP AGAEAASHQH  2100
DDEAGNVHFS RGVNTAGLSA LPAAEAAAAA ASASDKAATS KAMARVPHSN AMGSQPMLTY  2160
AIEGFPHAMD IQQALKDAVA SINAHDISRA GGIASSMGPA LAWPPPAALQ GAAGALGTGF  2220
AVPAHAAAAL GAQAKQMPLL GAQLARLPHQ PGLTDALALL QANQMTGIPL HPSLLQVSSS  2280
QVLAGADVLP PQMLGIAVRP NLAAAGAPAW AGGQLNVPLE LLQQLDANAA RLAALQQLHQ  2340
AQQPPKEGPA GSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	171	RERDRDRERER
2	187	197	RERDRDRERER
3	189	199	RERDRDRERER
4	559	563	KRRRI
5	982	990	PPAKRIKLD
6	1387	1397	RERDRDRERER
7	1389	1399	RERDRDRERER
8	1391	1401	RERDRDRERER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	2e-15	MYB family protein