PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz16g07200.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family MYB_related
Protein Properties Length: 349aa    MW: 38424.2 Da    PI: 5.9744
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz16g07200.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.5e-153276147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +W+ eE++++++a +++  + Wk+I + +g ++t  q++s+ qky
    Cz16g07200.t1 32 RESWSNEEHDRFIKALQMYNRD-WKKIEAFVG-TKTVVQIRSHAQKY 76
                     789****************977.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MNYAPGQNSA DEDDVNAPSK KARKPYTLTK QRESWSNEEH DRFIKALQMY NRDWKKIEAF  60
VGTKTVVQIR SHAQKYFQKV IKSGAADVIP PPRPKRKASD PSTPAGANAD KRNRSADTQQ  120
KSSSSKASGR HPSTAAAPTV EGKLQDAPDH HQHHHQESQP QPSTARAGGD LEVSAAQLEA  180
CKSAISSQGL QRAYGFLLSM FEDQQTDHVE MLQSMPVRDR HIVHKLLNVL QEELSSASTG  240
RPHSHSQQQQ QQEHHQYHGE DSSNSRRRPG HRAARSRHAR DGHLQPDAGG DADDEEDGDD  300
NDLIDNDDEE ADGDDDNDNE PGDEPEVSSS DHSSQRLAQA PGNEGANT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.18e-41MYB_related family protein