PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz16g11050.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family MYB_related
Protein Properties Length: 429aa    MW: 46475.4 Da    PI: 6.7756
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz16g11050.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.25.1e-104361347
                     HHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 13 vdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++a+k lG++ W++Ia++++ gRt   +k++w+ +
    Cz16g11050.t1  4 IQAHKALGNN-WSAIAKMLP-GRTNAAVKNFWYAH 36
                     68******99.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MACIQAHKAL GNNWSAIAKM LPGRTNAAVK NFWYAHKRRH QRYLEKIKSN KGISSPSESQ  60
SEDSQSSESA DVEVTPPISN VKNGDKPEGV PSPGERSAGG SNSDGSSDFP NAMGKSPTFS  120
SSTHAAWQDI PQLSLPHQLA LHNKEPSTDS SSSDNNHLPG GATEMCLPGT PQPLGPNHIT  180
PHPHGDYPMH MHGHHHLQSV PLFDSWDMLP DVSTAGLRSG SQTHHYHDSC NAIKGEYGEI  240
TQDMVSSRLD GLRQHLLQHG KTAGGMHLGN LDGSSSQMWN PSSDMNMLHV GTPAFNTPNH  300
YHKSMLPYST NSSISYQPPH GIHMSPVTTS LSYCHHRPLP PMGQVTTGIC SSTPFTPSTV  360
GNNYPQNADL ESPRLSCGSH GGSPDMTNTG RSCHAEIALA QRQLELLVNL PDEHELIEQK  420
INHNLWDM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.25e-09MYB_related family protein