PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz19g10020.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

G2-like

Protein Properties

Length: 920aa MW: 96458.6 Da PI: 6.4658

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz19g10020.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.1	5.4e-25	561	613	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r++W+ +LH++F+ av++L G+++A+Pk il lm+v+g+t+e+v+SHLQkYRl Cz19g10020.t1 561 ARMVWSGDLHTKFMTAVHRL-GINNAVPKCILALMNVDGMTRENVASHLQKYRL 613 7*****************.******************************8 PP
2	Myb_DNA-binding	22.9	2e-07	562	612	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ W+ +++ ++ av++lG + +k I + m+ g t++++ s++qky+ Cz19g10020.t1 562 RMVWSGDLHTKFMTAVHRLGINnaVPKCILALMNvDGMTRENVASHLQKYR 612 789*****************999***********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 920 aa Download sequence
MGSQNAPPPW FLTGQVLQQL LPPPSDEQQQ RHQQVLLAAL QTNPSYAAAA AAHIWSLAKA 60 ADEQYVRAQQ LKEQDGGCTA SSFPRYPQYL HAPGHSSSPG APTSDGFSNV VQAYNCIHTA 120 GNADVISSNG GSACRQQSKV LAQPAVVLRP TPKLPPLHLA TGAFAAYQSP GKTHNQPSPA 180 LDSKPLGPAA KQHAAEQAAD KNQQQQQHQQ DRPVPTNDKS ATNPSSQSTG TQQGAGLNRS 240 GSGSGSEEAP LHQPTLMMTK AVADDVMLPH KCHGKRSKHG KTHHHQHHVH HHHRHHHHHH 300 HDNHQHASHD KEHPVAAAAG AGGDRQESLM APGVQDDGSD VGKHFKHNGK SEPCQAAFEQ 360 GGGRQASSDD IDGEDKLSPV NTATAKTSCS RDMHGDFEGD VVHQQEDGEQ YTDHHNSNDE 420 EQGDTTADDD DDDDDDHGRH QDDDHDDHKH VEDHPDDGDD DDQPHPSSHT GASHSEGEME 480 EDAGADGGGH QLHHYSHDQA DSSRKRKHKD LSCSELPPIM VPGATAYASN GSLPDELGGT 540 GGSSSPHQGE GGGCHKLSKR ARMVWSGDLH TKFMTAVHRL GINNAVPKCI LALMNVDGMT 600 RENVASHLQK YRLALKKLAG VGANDPIPDA KVDEVQAIAM KQHQEKQEQM VAHQREQAQA 660 AAQQQICETL AMYGLHQQAM ASAYGPYAGA AGMMPPYMTG MAPAPPSAAG AASSQQAAAA 720 AAQQQQQHSP TLAPHQSSTL LKNATAAMAA AANSYPPLSA MLHMGGGGGG AGGYPLLQPP 780 PMAGPPGGSM PQTAGSMYSN GQALMGSAGN NPYQQLSGLM GMNPEPLTAS QAFQQQQSRN 840 ANALAAAAYL QYLNAYAHVP GAHGSSSYGA MGGNGFPGCV GGGGAWGPGL LPPPPAPPVS 900 GGGHVMSEPM ITSLPGLPL*

Sequence ? help Back to Top

Protein Sequence Length: 920 aa Download sequence

MGSQNAPPPW FLTGQVLQQL LPPPSDEQQQ RHQQVLLAAL QTNPSYAAAA AAHIWSLAKA  60
ADEQYVRAQQ LKEQDGGCTA SSFPRYPQYL HAPGHSSSPG APTSDGFSNV VQAYNCIHTA  120
GNADVISSNG GSACRQQSKV LAQPAVVLRP TPKLPPLHLA TGAFAAYQSP GKTHNQPSPA  180
LDSKPLGPAA KQHAAEQAAD KNQQQQQHQQ DRPVPTNDKS ATNPSSQSTG TQQGAGLNRS  240
GSGSGSEEAP LHQPTLMMTK AVADDVMLPH KCHGKRSKHG KTHHHQHHVH HHHRHHHHHH  300
HDNHQHASHD KEHPVAAAAG AGGDRQESLM APGVQDDGSD VGKHFKHNGK SEPCQAAFEQ  360
GGGRQASSDD IDGEDKLSPV NTATAKTSCS RDMHGDFEGD VVHQQEDGEQ YTDHHNSNDE  420
EQGDTTADDD DDDDDDHGRH QDDDHDDHKH VEDHPDDGDD DDQPHPSSHT GASHSEGEME  480
EDAGADGGGH QLHHYSHDQA DSSRKRKHKD LSCSELPPIM VPGATAYASN GSLPDELGGT  540
GGSSSPHQGE GGGCHKLSKR ARMVWSGDLH TKFMTAVHRL GINNAVPKCI LALMNVDGMT  600
RENVASHLQK YRLALKKLAG VGANDPIPDA KVDEVQAIAM KQHQEKQEQM VAHQREQAQA  660
AAQQQICETL AMYGLHQQAM ASAYGPYAGA AGMMPPYMTG MAPAPPSAAG AASSQQAAAA  720
AAQQQQQHSP TLAPHQSSTL LKNATAAMAA AANSYPPLSA MLHMGGGGGG AGGYPLLQPP  780
PMAGPPGGSM PQTAGSMYSN GQALMGSAGN NPYQQLSGLM GMNPEPLTAS QAFQQQQSRN  840
ANALAAAAYL QYLNAYAHVP GAHGSSSYGA MGGNGFPGCV GGGGAWGPGL LPPPPAPPVS  900
GGGHVMSEPM ITSLPGLPL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59570.1	3e-23	G2-like family protein