PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00261.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ZF-HD
Protein Properties Length: 171aa    MW: 19802 Da    PI: 8.8657
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00261.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer67.72e-213282457
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                 ++++eC++N Aa++Gg + DGC+ +++++   + ++  +CaACgCHRnFHR   
    Dr00261.1 32 ANFQECMRNFAAQTGGFVRDGCQQYLENP---TAPEPNTCAACGCHRNFHRMVI 82
                 679***********************984...5689***************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MPNLRGVSIA FLVREKEXHK EVARNMANFD MANFQECMRN FAAQTGGFVR DGCQQYLENP  60
TAPEPNTCAA CGCHRNFHRM VIIRNHVHGP NNEAGNNEQN NVLQVENPNE RLPRTRFSDY  120
QRHRMNQYAG QLHWIMPRSA VGNAELASFC AEIGITRHSF QIWMNNQRNR R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14687.12e-20ZF-HD family protein