PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00337.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 809aa MW: 89220.4 Da PI: 7.2258

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00337.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	64.9	2.4e-20	465	574	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy 109 td e+v +L + g+++++ +vi+ev+ +++ePw+ p e+ +y + d + ++g+++ r tk+gyWk+ g+ ++ + ++ ++g k+ L fy Dr00337.1 465 TDVEIV-LFLGGRRVGDPIPA-TVITEVNPFSIEPWNSP------EHILYLYNLDDGQRKKGSNEIRETKDGYWKTMGEVSKIST-GSDVMGRKTALEFY 555 789999.89999999999999.89************9......3568******************************99.999******* PP NAM 110 kgrapkgektdWvmheyrl 128 g+ p g kt W+mhey+ Dr00337.1 556 IGSPPFGDKTCWMMHEYQT 574 ***************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MKRRNGKWSS ENGVLLCWER KEEKNESLGD LNLCFVGRVP YRMRIRQPLL FSIAFSVPFL 60 PVSFRFEGAD HRRMEVATAT SLLHPLLLRT KPKLLRNASA SLRSSTVRLS EGASRVCIGR 120 RWTSSAPLRQ RYLLSKTYAV RGESEVPDVV DGKILAGSMV TVALAVANRV LYKLALVPMK 180 QYPFFLAQVT TFGYVAVYFT ILYVRYRVGI VTMGMLGVPK SQFMAIGLLE ALGVAAGMAA 240 GAQLPGPAIP ILSQTFLVWQ LIFSVLILGR RYSYNQVLGC SLVIAGVVLA VASGSSEGQF 300 LSQIGFLWPA LMVASSAFQA GASILKEFAF IDGARRLQGK PLDIFIVNSF GSGFQALFVF 360 LLLPFLSHLR GCEGAPLLPL LFIATNMAFN IFLLNLVKMS SALVSSLVVT LAVPMSIFIL 420 SLPLPYIPQG ASLNFWFVIG TGWFLIMMCT SVSNSVVLGI NALSTDVEIV LFLGGRRVGD 480 PIPATVITEV NPFSIEPWNS PEHILYLYNL DDGQRKKGSN EIRETKDGYW KTMGEVSKIS 540 TGSDVMGRKT ALEFYIGSPP FGDKTCWMMH EYQTEWKTCQ GIRIVQEYSS LCKVFWQSDW 600 RPEHEEQHSS VGLDCTDDAD AEYLEAIMLS LLEEDEGNLS PHYDANSTQA VHGEDQRNGA 660 ASDNTMVDKD ANLDFINEEY IELNDIDHQE SSSSSSSSSS SNSCNSSVME MDSNEYFDAD 720 ALLKELTNDK HTNCKFNISA SAKSNQIIIR PSPAGSIISS NNNNNNNNNN NKEPPKPDKS 780 PNIQQSSGKS GSVGRITKLG KRYCCFASF

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MKRRNGKWSS ENGVLLCWER KEEKNESLGD LNLCFVGRVP YRMRIRQPLL FSIAFSVPFL  60
PVSFRFEGAD HRRMEVATAT SLLHPLLLRT KPKLLRNASA SLRSSTVRLS EGASRVCIGR  120
RWTSSAPLRQ RYLLSKTYAV RGESEVPDVV DGKILAGSMV TVALAVANRV LYKLALVPMK  180
QYPFFLAQVT TFGYVAVYFT ILYVRYRVGI VTMGMLGVPK SQFMAIGLLE ALGVAAGMAA  240
GAQLPGPAIP ILSQTFLVWQ LIFSVLILGR RYSYNQVLGC SLVIAGVVLA VASGSSEGQF  300
LSQIGFLWPA LMVASSAFQA GASILKEFAF IDGARRLQGK PLDIFIVNSF GSGFQALFVF  360
LLLPFLSHLR GCEGAPLLPL LFIATNMAFN IFLLNLVKMS SALVSSLVVT LAVPMSIFIL  420
SLPLPYIPQG ASLNFWFVIG TGWFLIMMCT SVSNSVVLGI NALSTDVEIV LFLGGRRVGD  480
PIPATVITEV NPFSIEPWNS PEHILYLYNL DDGQRKKGSN EIRETKDGYW KTMGEVSKIS  540
TGSDVMGRKT ALEFYIGSPP FGDKTCWMMH EYQTEWKTCQ GIRIVQEYSS LCKVFWQSDW  600
RPEHEEQHSS VGLDCTDDAD AEYLEAIMLS LLEEDEGNLS PHYDANSTQA VHGEDQRNGA  660
ASDNTMVDKD ANLDFINEEY IELNDIDHQE SSSSSSSSSS SNSCNSSVME MDSNEYFDAD  720
ALLKELTNDK HTNCKFNISA SAKSNQIIIR PSPAGSIISS NNNNNNNNNN NKEPPKPDKS  780
PNIQQSSGKS GSVGRITKLG KRYCCFASF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	3e-21	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr00337.1