PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00415.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 367aa MW: 42343 Da PI: 5.1047

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00415.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.1	1.2e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+ +yLk+k++g ++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++++s +++ Dr00415.1 6 LPPGFRFHPTDEELIIYYLKRKINGVNIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATHAGYWKATGKDRRICS-QKQ 103 79**************************.99**********95334455777**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLv+y+grap+g +tdWvmheyrl Dr00415.1 104 AVGVKKTLVYYRGRAPHGGRTDWVMHEYRL 133 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MAPMTLPPGF RFHPTDEELI IYYLKRKING VNIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATHAGYWK ATGKDRRICS QKQAVGVKKT LVYYRGRAPH 120 GGRTDWVMHE YRLDEKECET GSALHDAYAL CRIFKKNALG PKIVTHYGAN NSHDQQHSQW 180 ITLDPSPPNK SRDEELAFSS NPLQDDNTWR FQESFLPSEV IPHNSSYILF RQKLIMCVCV 240 CVCVLKVDVA LECAKLQHRL ALPPLEVEDF PQVDLMEFKT ANDGLFKEIL SVASASQELL 300 INNSICQDLE FDDQFGSVCD GVGEYSKLIE MSELEDEFTE FSGIRTLDHD AVFEIGFEHE 360 EKQRYVI

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MAPMTLPPGF RFHPTDEELI IYYLKRKING VNIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATHAGYWK ATGKDRRICS QKQAVGVKKT LVYYRGRAPH  120
GGRTDWVMHE YRLDEKECET GSALHDAYAL CRIFKKNALG PKIVTHYGAN NSHDQQHSQW  180
ITLDPSPPNK SRDEELAFSS NPLQDDNTWR FQESFLPSEV IPHNSSYILF RQKLIMCVCV  240
CVCVLKVDVA LECAKLQHRL ALPPLEVEDF PQVDLMEFKT ANDGLFKEIL SVASASQELL  300
INNSICQDLE FDDQFGSVCD GVGEYSKLIE MSELEDEFTE FSGIRTLDHD AVFEIGFEHE  360
EKQRYVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr00415.1