PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00430.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 203aa    MW: 22452.1 Da    PI: 5.5359
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2445.7e-1457105255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+G+r ++   +Wv+eIr+p+    +  r++lg++ t+e+Aa a++ a  +l+g
  Dr00430.1  57 KYRGIRCRS--RKWVSEIREPR----KaNRIWLGTYPTPEMAAVAYDVACHALKG 105
                8****9776..5********95....358*******************9988877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MADDHSHVSQ SHVYEFHQQQ QQQESTIVCQ QPFTQSVSSS SSSSSSHVGR GSSDHRKYRG  60
IRCRSRKWVS EIREPRKANR IWLGTYPTPE MAAVAYDVAC HALKGKDAVL NFPECIGSWP  120
TPVSLSPADI RAAAAAAAAV MRPEIGENGK DVVEFVDEEE LFDMPLLLMN MAEGMLMSPP  180
RLSPSCSDDS PHVSESESLW SYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-37ERF family protein