PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00487.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 412aa    MW: 46305.4 Da    PI: 5.8964
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00487.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.000243043371654
                HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                + +++  L++++ +      +K + a++L +A++YIk L
  Dr00487.1 304 LADRITALQQIVSPF-----GKTDTASVLMEAINYIKFL 337
                668999999999998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MAQESLEASV ASSSSTPSWW PELHANPISS WQTLNQWQPQ SHHSTSSCDE EISASSASFA  60
NAAGHSSLSM DSPPAGDLSQ EPVAMENQLW SQVLLRSVGS GGHDMHQNHE EIRENFHEVL  120
SSKRDHMFNP ACDYLKKMDN SWEINNPHTL NNLEKQLNSY NNGDLMEPQR LTNLSDLVSN  180
WSIAPPDPHL DHQIASSPCF QYIKHGIPNS LANNYPSITG VFGDRNSCYL PYMHEIKMEN  240
RQHDIGSSEM FSGYHIGVSN TDVPWSGSRN TASDFISFKP VEIRDSKIFV KSSDSSLQVP  300
KVKLADRITA LQQIVSPFGK TDTASVLMEA INYIKFLHEQ IQLLSDPYMK SNANKDHNAW  360
GGIDQRKDKA DQKFDLRSRG LCVVPVSCTP EIYKENNGPD YWTPTYRGCL YR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.13e-45bHLH family protein