PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00658.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 264aa MW: 30380.4 Da PI: 8.3036

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00658.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.3	1.3e-52	6	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeel+v+yL++++++k++++ +i+ v+iyk++Pw+Lp+k + e ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s k++ v Dr00658.1 6 LPPGFRFHPTDEELIVHYLRNQASSKPCPV-PIIPAVNIYKFDPWQLPEKSEMVEGEWYFFTPRDRKYPNGGRPNRAAVSGYWKATGTDKAIYS-KSKYV 103 79**************************.88***********88777788***********************************.9999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkk Lvfy+gr pkg+kt W+mheyrl Dr00658.1 104 GLKKALVFYRGRPPKGSKTGWIMHEYRL 131 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MRTNSLPPGF RFHPTDEELI VHYLRNQASS KPCPVPIIPA VNIYKFDPWQ LPEKSEMVEG 60 EWYFFTPRDR KYPNGGRPNR AAVSGYWKAT GTDKAIYSKS KYVGLKKALV FYRGRPPKGS 120 KTGWIMHEYR LDGSFANNNS TMPSKVLDEW VLCRIYEKKH HGRNRNNNTN MIEDAQECSP 180 SEETVVTDST KLSEFEEKKH VFPRSCSLAR LLEPDYLTSS ASFLVDESPF FNSMDEMFES 240 KVGSNNGTLF GFPIHVDPLF FPFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	8e-93	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr00658.1