PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00669.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 240aa MW: 27445 Da PI: 6.3974

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00669.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106	2.1e-33	20	74	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt eLHerFv+av+qLGG ekAtPk+++++m+v+gLtl+h+kSHLQkYRl Dr00669.1 20 KPRLKWTRELHERFVHAVSQLGGVEKATPKSVMRMMGVPGLTLYHLKSHLQKYRL 74 79****************************************************8 PP
2	Myb_DNA-binding	63.7	3.5e-20	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT e++e++v+av qlGg t+k+++r+mg g+tl+++ks++qky+ Dr00669.1 22 RLKWTRELHERFVHAVSQLGGVekaTPKSVMRMMGvPGLTLYHLKSHLQKYR 73 89****************77***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MQSQVSSTTT NSNLLSVDAK PRLKWTRELH ERFVHAVSQL GGVEKATPKS VMRMMGVPGL 60 TLYHLKSHLQ KYRLSKIRDH DSKKQEICEL DDACKQQSMN ETVLRIQMEV QRKLQEQIEV 120 QKHLQIRIEA QGKYLQAVLR KAQETLASYA SNSMGVEEAK AEITELVCAV DSECLSSGFM 180 VTKRETRQQH GDCSIDSCLT TCEKTEGNNE EFGETNPDCR KVCDQEEQRF QEKQEFDLNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	5e-62	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr00669.1