PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00682.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ZF-HD
Protein Properties Length: 186aa    MW: 20679.4 Da    PI: 8.0986
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00682.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer94.49.3e-301867458
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 + Y+eC++NhAas+GghavDGCgEfmp+     +++ l CaACgCHRnFHRr ++
    Dr00682.1 18 ILYRECMRNHAASIGGHAVDGCGEFMPT-----QSSPLCCAACGCHRNFHRRLST 67
                 68*************************8.....5789***************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDPALELKKS LHHSPEIILY RECMRNHAAS IGGHAVDGCG EFMPTQSSPL CCAACGCHRN  60
FHRRLSTSST PVESSSGDDD EQDHPSAPHM LMALSAVAAP KKRFRSKFSP EQKERMLRLS  120
ERLGWRMQKK DDLVIEQSCK EIGVDKNVFK VWMHNNKHHF YEASRRTGEV ATGGVGDVLN  180
GSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.14e-49ZF-HD family protein