PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00719.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 251aa    MW: 27887.2 Da    PI: 5.3021
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00719.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-2090139255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f+ta eAa a+++a+ kl+g
  Dr00719.1  90 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAHEAALAYDEAAFKLRG 139
                59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MATAIDFYSN WPSFSSDPSQ MELMQALEPF FKSASPSPSL XPSWDQNLSF DSYLSFNGMQ  60
NNQKGGSFLS VQPLPMKHAG TPSPAKPXKL YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF  120
DTAHEAALAY DEAAFKLRGD FARLNFPNLR HSSATSLHSS VDAKLQAICQ TLQAPDSTSX  180
SKTPTTTNTS SSPSLSSSSL SCDQEDESSA GSSPVSEMQS LDFTEVPWDE SESFVLRKYP  240
SWEIDWDAIL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.13e-58ERF family protein