PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00784.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 1252aa    MW: 140459 Da    PI: 4.9958
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00784.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.41.4e-19571841128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                lp+G++F+P+de+l+++ L k  +gk      +   ++ ++++d    i +++P  Lp  +k++ +  yfF++  k++      +r+  +  W++ gk k
  Dr00784.1  57 LPRGVKFDPSDEDLIWHLLGKTGKGKVmphpfI---NIfVTSLDddimIGHTHPDFLP-GIKQDGRPSYFFHRILKTQ-----FERQ--NICWNKIGKAK 145
                699************999998888888664442...222333322333899*******.778889999****987754.....4453..346******** PP

        NAM  91 evlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                +vl+ +g   g k+++++y  +++ +k e+t+Wvmh+y+l
  Dr00784.1 146 PVLV-DGIYPGSKNIMILYvnEQNGEKLERTNWVMHQYQL 184
                ****.999***********6656677778*********97 PP
2Myb_DNA-binding48.52e-1510161056547
                       -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding    5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47  
                       +  E++  +d++++lG++ W++Ia++++ gRt++++k++w+++
        Dr00784.1 1016 SDSEEQMVIDLHARLGNR-WSKIASHLP-GRTDNEIKNHWNTH 1056
                       788***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1252 aa     Download sequence    
MEDELDLLPL SKRLKLLVSM KPSSPLVVSS IPAPPQCSGG VSVEPVLNEV YQKWPGLPRG  60
VKFDPSDEDL IWHLLGKTGK GKVMPHPFIN IFVTSLDDDI MIGHTHPDFL PGIKQDGRPS  120
YFFHRILKTQ FERQNICWNK IGKAKPVLVD GIYPGSKNIM ILYVNEQNGE KLERTNWVMH  180
QYQLGAEEVE EGALVLSKVF YQQRHKASRK GGQDMASDSI GVVLNEVKPL AGAELVLSES  240
HSENQHSDIN YVLKPSQMST CYQIGSNDDY FEQQKLGYGN HPESFASEEE NCAKSCECGQ  300
SQMSCDLGQD MRRCQKDAQV SVSTSTPNSS ESVITQSPSV VVQILSITNS GKSNSLVQTD  360
YHTESKEIGQ ILSCQVSASD INSDHRTCDT FKTNDLEYLR TDTCAPEKNI NSSYMVPDAR  420
SHSDSPSSVI PLSLEGQDSN HRQSYETRTL DANLSSSQEL KPENINGDNL LLDPSFPVKV  480
KREPSEGEAG STCEVHNVVT HYASKENHAQ DDNLSGGRNI QNCLSLSGLP LESPFVNTQC  540
SKKAAKYPDN VLLGKDNMPA ESDSIGYGRS LHPEERNLKA VNRHSNSASS NSIGKVKFEP  600
LENCIPVPGQ TDFPRDEVKI ELANDNSSDI DNIPLIDRMR MLVSLSVTGV ECSGKKRCPE  660
PTALPASSFD SFNSENPKRK SFSLRKKRKK TATNSVETAL EEDAPGLLEV LLDKGITAEE  720
IKLYGDVDDD DDDVGDVFSN EDSFEDLESV ITKFFSERSS LFKLPSSRQV KGSKVDYCLP  780
CLIALIEQTR YLRFRNNPVE WGWCRDLQSF IFVFEKHNRI VLERPEYGYA TYFFELVDSL  840
PIKWQIRRLV TAMKLASCSR TAIIENKTIL AEDLTEGEAR VLEAYGWAPN TGLGSMLNYC  900
DRVVHDKRND WFISEWRARI ARLLIEGYSG GCTVLSDLPK KVVEYMSNQN PEIKLEVELE  960
HGGDCYPEIK WERWNANGSR YVGDLSSSIG LLRCGKSCRL RWTNYLRPDL KRGLLSDSEE  1020
QMVIDLHARL GNRWSKIASH LPGRTDNEIK NHWNTHIKKK LKKLGIDPLT HKPLPSTDQQ  1080
HLQQQQQQQQ QQKEEDDDDD DDYKKNAVVS MESRDEFCTD EVPLIQPHEI LVPSSSSSSS  1140
SSSSSCSSSC MDWLEPMHFW GLDEFMSGWD FFGDDANGVL WTTTTTTTSS LDHDLLLQCP  1200
RSTLATTPTT TTSSLDHDLL LQCPRSTLAT TPTTTTSSSS YFDQEAWKFE LF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1686690KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.12e-51MYB family protein