PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01027.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 312aa    MW: 33312.5 Da    PI: 5.9162
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01027.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.7e-08160204554
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                h+++Er RR+ri +++  L+ellP++      K + a++L +  +Y+k L
  Dr01027.1 160 HSIAERLRRERIAERMRALQELLPNS-----NKTDRAAMLDEILDYVKFL 204
                99***********************7.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MANHPQTHPD AIGDDDFFEQ FLSMPSYTSA DPGSSGPEAG LSGIALQLSS GDGSAAGFPG  60
SVFPLGLSLE QGRGGFPLPE EASGSGKRFR DDVDGKAPPK PELASLFPAF GQVQAHQIRP  120
NPPPQVFHAQ VAHGGVTAGP QPPAPRPRVR ARRGQATDPH SIAERLRRER IAERMRALQE  180
LLPNSNKTDR AAMLDEILDY VKFLRLQVKV LSMSRLGGAG AVAQLVADIP LSSVEGDTSE  240
GGNKQQVWEK WSTDGTEKQV AKLMEEDIGA AMQFLQSKAL CIMPISLATA IYHSQPQPES  300
PTVVKPEPNS SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165170RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.24e-71bHLH family protein