PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01063.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 260aa    MW: 29392.2 Da    PI: 10.3501
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01063.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.5e-31194251359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+y+WrKYGqK++kgs++pr+YY+C+   gC+++k+ver+ edp+++++tYegeH h+
  Dr01063.1 194 DEYSWRKYGQKPIKGSPHPRGYYKCSIVrGCTARKHVERCLEDPSMLIVTYEGEHSHT 251
                9*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEEVVKIHRD AVFSCHGVLD KISQSQNQAL CGTLMAETRE VVSKFKKLGS MLDNTVGHAR  60
FRKLKEAPFP LKMKHNIFLG NQTDLFPKFD AQFLKEKQLN KCQVDMNGVN LKLCSTSMTS  120
AKSLLSSLSV ENHSFGGLNM KSFSLNNLTH KKKCSSRGDV GSINCHCFKK RKLKMRRSIK  180
VPAISHRLAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCSI VRGCTARKHV ERCLEDPSML  240
IVTYEGEHSH TKSLTQSAHP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151172KKKCSSRGDVGSINCHCFKKRK
2152172KKCSSRGDVGSINCHCFKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.13e-70WRKY family protein