PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01365.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 172aa MW: 19514 Da PI: 5.4179

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01365.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.3	8.9e-11	12	62	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksLq 55 +++E++RRd+++ +++L +llP+ s p++K ++ e L +Av+YIk+Lq Dr01365.1 12 RKIVEKNRRDHMKLLLSNLDSLLPNYS--PNTKexVTMPERLDEAVKYIKELQ 62 5799*******************54..666666***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MEIDKAAPKL ERKIVEKNRR DHMKLLLSNL DSLLPNYSPN TKEXVTMPER LDEAVKYIKE 60 LQMRVERMKE NREGLGCYEG TSQQKNLKMG VEVQDMGSGL SVFLLSFSGG FSAYSKVLRV 120 LEEEGLEILA ANFVSGEVAF IIVHCLVAEN XGFEADEVME RLKKVVQGYT RN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	1e-11	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr01365.1