PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01366.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 176aa    MW: 19391.3 Da    PI: 8.3105
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01366.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.82e-081261554
               HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
        HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
                +++E++RRd ++  +++L +llP+ +  ++ kK     e L +Av+YIk+L
  Dr01366.1 12 RKIVEKNRRDYMKLLLSNLDSLLPNyS--PNTKKmIALPERLDEAVKYIKEL 61
               5799*********************55..4555579999***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MKNSKAAPKL ERKIVEKNRR DYMKLLLSNL DSLLPNYSPN TKKMIALPER LDEAVKYIKE  60
LKMKVEKMEK KECLSGSEGT SQQRQGNITI DVEVQDLGSG LSMLLLSLQG GFLXFSEALL  120
VLEEEGIEIV NASFVSGAMP CMSTIHCSVA DNTGSGFDAV IKVVQRLKKI CSGSQS