PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01380.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Protein Properties

Length: 238aa MW: 27500.7 Da PI: 9.5492

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.5	1.5e-10	19	94	15	97
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 l +p fa+++ ++++++ t+ + + + W vk+ + ++ +++GW+e ka +L +g vvF+++g++ f ++kvf Dr01380.1 19 KLHIPQAFAKHIAKDNHGKATIFILN---KFWHVKV--QEDEQGLHFGDGWQELRKALDLMDGYNVVFSYEGNMVF--TLKVF 94 589****99988888889999999...9**..9***********************************..66666 PP
2	B3	49.6	7.2e-16	146	223	8	89
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++ + l++p +fa+ g+ ++k++ l+d++g+ W+v++ + +g++ ++kGW +F + n++k+gD + F+l+++++ Dr01380.1 146 ESNIVYSYLCIPSEFASLAGLL--TPKQVFLKDQTGKLWSVNV--NHFRGTTKFQKGWGKFIQHNNVKSGDLCRFELISKEN 223 445555679*****777888..5667***********..88899999*********************998554 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MEKTPKHQFL VKLINPGSKL HIPQAFAKHI AKDNHGKATI FILNKFWHVK VQEDEQGLHF 60 GDGWQELRKA LDLMDGYNVV FSYEGNMVFT LKVFDLSCCR KYDFMSNYTV PLKKRKIQHA 120 DNNLRHFNVD DVCESVRPAF QREISESNIV YSYLCIPSEF ASLAGLLTPK QVFLKDQTGK 180 LWSVNVNHFR GTTKFQKGWG KFIQHNNVKS GDLCRFELIS KENVIISVNI TKAWNVSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31690.1	2e-19	B3 family protein

Link Out ? help Back to Top
Ensembl	Dr01380.1