PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01413.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 301aa MW: 34386.1 Da PI: 7.3563

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01413.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105	9.3e-33	45	186	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.......vikev.diykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknra........t 78 lp+G++F+Ptd+el+ e+L+ kv +++ + +i+ +i++++P++Lp ++ +f s +k+y+tg+rk+r+ Dr01413.1 45 LPAGVKFDPTDQELI-EHLESKVLSEDtatksH---PlidefipTIEGEdGICYTHPEKLP-----GKPfPFFFLSLPSKAYTTGTRKRRKiqnecdlqK 135 799**********.9999999555551...044554444776646******.....33326688888999******8566666554 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Dr01413.1 136 GETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 186 4788********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MMNRKASVST ADLIDAKLEE HQICGSMQCP SCGHKLDRKP NWVGLPAGVK FDPTDQELIE 60 HLESKVLSED TATKSHPLID EFIPTIEGED GICYTHPEKL PGKPFPFFFL SLPSKAYTTG 120 TRKRRKIQNE CDLQKGETRW HKTGKTRPVM VNGKQKGCKK ILVLYTNFGK HRKPEKTNWV 180 MHQYHLGELE EEKEGELVVS KIFYQTQPRQ CHLKTDNLVF DEVEEQQREA AFHVSRPSNP 240 ISTVIPPTPL HQTSIVLDDP FRMSFQQQQH QRMIERSGSG LEDVIMGCTS TENKGESSMQ 300 Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-104	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr01413.1