PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01435.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 568aa MW: 62203.1 Da PI: 9.3802

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01435.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.6e-39	385	443	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+ kcprC+stntkfCyynny+lsqPr+fCkaCrryWtkGGalrnvPvGgg+rkn k+ Dr01435.1 385 EQPAKCPRCESTNTKFCYYNNYNLSQPRHFCKACRRYWTKGGALRNVPVGGGSRKNSKR 443 7889***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MRFLGGAREP YGGARLPING VRGRARNSLG GSRGGARLFH VGHHRDSRTS APSHHFISGA 60 PSDYPSQPPE ARPSTNKNSP VKDGVSFAEV VRHSPPPESS RPPQSKLDAG PSSSLKRRRS 120 XENDEICKRC LRSGHKIXDC RHQLTCXRCS GTGHFAARCP LKYSSXGHLP ENDRSKRPPP 180 TSKPLLHVPV PRSITESHSL RVSLPISEAI IQSKEDLKRR VIIKVISGNA SVRSLHNALP 240 VHLNTDQCEN ITPYGDDFIL TLYSIRAAVY IVKKGRLTLN TIHGPCTVSL SHWTPEFGSH 300 AVAAGNYNWV RISNLPLHCW NWDSIVTVLK PLGDLIFVQK KEDVSLEHMR ALYYCFLMEG 360 PPPPPSLQAP PTPSQALQAP PSMEEQPAKC PRCESTNTKF CYYNNYNLSQ PRHFCKACRR 420 YWTKGGALRN VPVGGGSRKN SKRLSPNSSS STLPAAKRSS STSPPCNSSS VPDSELLSVF 480 PPPLDSEHHS VLGVSGSFSS LLNSSSQFGS FMEEFDQPAG EHLGLCLESQ QQSSTDSSGT 540 ENFLSLQGDW PGGWPDNLAI YTPGNGFQ

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MRFLGGAREP YGGARLPING VRGRARNSLG GSRGGARLFH VGHHRDSRTS APSHHFISGA  60
PSDYPSQPPE ARPSTNKNSP VKDGVSFAEV VRHSPPPESS RPPQSKLDAG PSSSLKRRRS  120
XENDEICKRC LRSGHKIXDC RHQLTCXRCS GTGHFAARCP LKYSSXGHLP ENDRSKRPPP  180
TSKPLLHVPV PRSITESHSL RVSLPISEAI IQSKEDLKRR VIIKVISGNA SVRSLHNALP  240
VHLNTDQCEN ITPYGDDFIL TLYSIRAAVY IVKKGRLTLN TIHGPCTVSL SHWTPEFGSH  300
AVAAGNYNWV RISNLPLHCW NWDSIVTVLK PLGDLIFVQK KEDVSLEHMR ALYYCFLMEG  360
PPPPPSLQAP PTPSQALQAP PSMEEQPAKC PRCESTNTKF CYYNNYNLSQ PRHFCKACRR  420
YWTKGGALRN VPVGGGSRKN SKRLSPNSSS STLPAAKRSS STSPPCNSSS VPDSELLSVF  480
PPPLDSEHHS VLGVSGSFSS LLNSSSQFGS FMEEFDQPAG EHLGLCLESQ QQSSTDSSGT  540
ENFLSLQGDW PGGWPDNLAI YTPGNGFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-28	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr01435.1