PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01472.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 572aa MW: 64365.7 Da PI: 9.4832

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01472.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.8	5.3e-29	482	540	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YY+C+s+gC vkk+ver+ e+ ++v ++Yeg Hnh+ Dr01472.1 482 LDDGFKWRKYGKKSVKNSPNPRNYYKCSSEGCGVKKRVERDPENSEYVLTVYEGVHNHQ 540 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MWGTTRQRKH QPKPYTILVF VFAGFASLVL SWWLRGLLHC RRSSPTNSRV PIMETCDHRA 60 VADSLTSRYC DWVHDALEDF PDAFLITDPA IAGHPIVFAS RGFLSMSGYA XEEVVGRNGR 120 MFQGPGTSRR SVMEIREAIR EERTLQISLL NYRRDGSPHW ILFHLCPVFA PCDGHRRVVH 180 FLSVQIPIPK RSRRXVVVST TCRDAMRMDX DLELDLANDD RGFEVEEWRE AGEWEKEKAA 240 SVAGEILSAL ARYGKLSSGK RAGVVLPRPL SSALNISLGR IKQSFVLTDP HLPDMPIVYA 300 SDGFSSLTGN LNKEMYTQHQ MVPVGGYSRL EVLGRNCRFL NGPGTDTKVL NQIKDSIKAE 360 KACAVRLLNY RKDRSPFWNL LHISPVRNAS GKIAFYVGVQ IEEGSKSNEH GLSPEMRQLG 420 TVGQVKVAVR SISSGAVKKT YVIDAVQLLD YGKTCGNNDM KRLKVDADLK IGFRTKSQVE 480 ILDDGFKWRK YGKKSVKNSP NPRNYYKCSS EGCGVKKRVE RDPENSEYVL TVYEGVHNHQ 540 SPANVSVQEI NTSWSSSSSD QIYAFDAYSK CF

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MWGTTRQRKH QPKPYTILVF VFAGFASLVL SWWLRGLLHC RRSSPTNSRV PIMETCDHRA  60
VADSLTSRYC DWVHDALEDF PDAFLITDPA IAGHPIVFAS RGFLSMSGYA XEEVVGRNGR  120
MFQGPGTSRR SVMEIREAIR EERTLQISLL NYRRDGSPHW ILFHLCPVFA PCDGHRRVVH  180
FLSVQIPIPK RSRRXVVVST TCRDAMRMDX DLELDLANDD RGFEVEEWRE AGEWEKEKAA  240
SVAGEILSAL ARYGKLSSGK RAGVVLPRPL SSALNISLGR IKQSFVLTDP HLPDMPIVYA  300
SDGFSSLTGN LNKEMYTQHQ MVPVGGYSRL EVLGRNCRFL NGPGTDTKVL NQIKDSIKAE  360
KACAVRLLNY RKDRSPFWNL LHISPVRNAS GKIAFYVGVQ IEEGSKSNEH GLSPEMRQLG  420
TVGQVKVAVR SISSGAVKKT YVIDAVQLLD YGKTCGNNDM KRLKVDADLK IGFRTKSQVE  480
ILDDGFKWRK YGKKSVKNSP NPRNYYKCSS EGCGVKKRVE RDPENSEYVL TVYEGVHNHQ  540
SPANVSVQEI NTSWSSSSSD QIYAFDAYSK CF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	4e-35	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr01472.1