PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01508.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 292aa MW: 32862.4 Da PI: 9.7377

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01508.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	30.8	5.7e-10	190	210	1	21
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK+vk++++p Dr01508.1 190 LDDGYKWRKYGQKVVKNTQHP 210 59*****************99 PP
2	WRKY	56.5	5.7e-18	223	270	10	59
EEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 10 YGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 GqK+ + + sYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ Dr01508.1 223 VGQKTC--NLKALSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHS 270 577765..56678************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MMFPSSASLM LNQRLVELDQ RNMPTSPMPF ISHQPSPSSP PPPPPPPPPP PLLHHHLTLL 60 PPYLLQSPLP PPPPPPSHHL RESLPMTSTS SYLPLNPRHD PCPPLSSNNI PRTWGEEGGM 120 SGKRTTTTAT ATATATTTLS VERQQNQKMI NSSGGNGLSV ASLRMKKVKA RRKVREPRFC 180 FKTMSEIDVL DDGYKWRKYG QKVVKNTQHP STIVEEEEDA RQVGQKTCNL KALSYYRCTQ 240 DNCRVKKRVE RLAEDPRMVI TTYEGRHAHS PSHDEDHDSH TPSSHHHPSF LW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	7e-39	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr01508.1