PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01512.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 313aa    MW: 36768.6 Da    PI: 5.997
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01512.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.37e-2871372128
        NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyat..gkrknratksgyWkatgkdkevlskk 96 
                  G+rF P+d+el+v  L++k+++     + ++vi ++++y++ePw+L+  ++++ e+e+y+Fs +++k+++  ++  +r++ +gyW+  g++ +++  +
  Dr01512.1   7 IIGIRFVPRDDELLV-LLHNKATSMLeiPQQFKVIIDANVYNTEPWNLRrDTLYKLENEVYYFSMAKRKSRQrrNSILERTAGNGYWHMNGQNIPIKY-N 104
                67************5.566665554445555688**************9557777889******9999987511445678899**************9.9 PP

        NAM  97 gelvglkktLvfykg.rapkgektdWvmheyrl 128
                ge+ g k+ L +y+  +++k ++t+W+m+eyrl
  Dr01512.1 105 GEVFGHKTXLKYYHYdKNKKKVQTKWLMNEYRL 137
                99***********653777789*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MSYVDLIIGI RFVPRDDELL VLLHNKATSM LEIPQQFKVI IDANVYNTEP WNLRRDTLYK  60
LENEVYYFSM AKRKSRQRRN SILERTAGNG YWHMNGQNIP IKYNGEVFGH KTXLKYYHYD  120
KNKKKVQTKW LMNEYRLKAL SDDFEKSAEL VLCRIQRTRT GSDVEEEFVY NYENQSXDFY  180
NIABHQATLA DQVQDPVNYD DWERPRSKRL KRDNINNGTQ YGNTNYQQQE DYQQQWLDTG  240
RENSTVAPPC YDMKHASKAG NEKGNAFXDD WMAMIEVPSP SVLXPFPDDV FKLEDYMMNA  300
SLNTAAATST TTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.24e-19NAC family protein