PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01516.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 321aa    MW: 37118.7 Da    PI: 6.9643
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01516.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.72.4e-156914554128
        NAM  54 eekewyfFskrdkkyatgkrk..nratksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                 e+e+y+Fs +++k+++g+++  +ra+ +gyW+  g++  ++  +ge+ g k+ L +y+  +++k ++t+W+m+eyrl
  Dr01516.1  69 LENEVYYFSXAKRKSRQGRNNilERAAGNGYWHMNGQNIXIKY-NGEVFGHKTALKYYHYdKNKKKVQTKWLMNEYRL 145
                46799*******999987654337999**************99.999***********653777789*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVRSLERSGG HSRREVDQDH RLTFAVAVAV AVAVDEGEQR DRLRGRMKIS LLITMERVHS  60
EIGDTSYKLE NEVYYFSXAK RKSRQGRNNI LERAAGNGYW HMNGQNIXIK YNGEVFGHKT  120
ALKYYHYDKN KKKVQTKWLM NEYRLKALSD DFQKATELVL CRIQRTRTGG DVEEEFAYNY  180
KNQSSDFYNI ADHQATLPNQ VQDPVNYDDW ERPRSKRLKR DNINNGTQYG STNYQQQEDY  240
QQQWLDTRRE NSTVAPPCSD MQHASEAGNE KGNAFGDDWM AMIEVPSPNV LLPFPDDVFK  300
LEDYMMNASL NTAAAATTTT T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.22e-11NAC family protein