PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01578.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 234aa    MW: 26410.5 Da    PI: 9.3622
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01578.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA30.45.5e-10122141120
       GATA   1 CsnCgttkTplWRrgpdgnk 20 
                Cs C+ttkTplWR+gp+g+k
  Dr01578.1 122 CSDCNTTKTPLWRSGPQGPK 141
                ******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MTTPISPTKL NQDNQSDHHL FNPRTTSFPC TIFFKTLQDQ AASGSDHTNP DHQHDHHQQK  60
KKDDLQTHQN NTCDDQCSRD HEEDTNKSTK WMSSTMRLMR KMTNQESIRN SPSGCNTFIX  120
VCSDCNTTKT PLWRSGPQGP KRKARRAMAA AAVAGDTGII PTDTLKKVKK QKGSNVDQSM  180
PFKKRCKILS SQENDKKKHW FELSKSLSLY SVLPPDERDA AILLMALSYG LICG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-15GATA family protein