PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01613.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 409aa MW: 46564.3 Da PI: 6.9762

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01613.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.7	2e-35	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWk 84 lp+G++F+Ptd+el+ e+L+ kv +++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ + +W+ Dr01613.1 46 LPAGVKFDPTDQELI-EHLESKVVSEEskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqtecdlhKGETRWH 143 799**********.999988885665443333333666646*******.555666799**************75666655444788 PP NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +tgk+++v+ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Dr01613.1 144 KTGKTRPVMX-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 188 ********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MNRTQGSTST TTDLIDAKLE EHQLCSSLQC PSCGHKLDRK PNWVGLPAGV KFDPTDQELI 60 EHLESKVVSE ESKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH FFHRPSKAYT 120 TGTRKRRKIQ TECDLHKGET RWHKTGKTRP VMXNGKQKGC KKILVLYTNF GKHRKPEKTN 180 WVMHQYHLGE MEEEKEGELV VSKIFYQTQP RQCSLSDRSA TTIEVRRDST GSGSCSSSKE 240 VVGQREEIMS SSFTAMDNFS FAPFRKSFDE VGLGEAPSQA CDEGDEXHEA QQRHVAFQVS 300 RPTNPISNVI SPAPLHQSSI VNLDDPYHVS RLLLQTDKFQ QQQQHQQQRL TERSGSGLEE 360 LIMSCTSADI KAETSIPHSQ ETDWLKYSSY WLPDSQDHHH HHHHHHHHG

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MNRTQGSTST TTDLIDAKLE EHQLCSSLQC PSCGHKLDRK PNWVGLPAGV KFDPTDQELI  60
EHLESKVVSE ESKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH FFHRPSKAYT  120
TGTRKRRKIQ TECDLHKGET RWHKTGKTRP VMXNGKQKGC KKILVLYTNF GKHRKPEKTN  180
WVMHQYHLGE MEEEKEGELV VSKIFYQTQP RQCSLSDRSA TTIEVRRDST GSGSCSSSKE  240
VVGQREEIMS SSFTAMDNFS FAPFRKSFDE VGLGEAPSQA CDEGDEXHEA QQRHVAFQVS  300
RPTNPISNVI SPAPLHQSSI VNLDDPYHVS RLLLQTDKFQ QQQQHQQQRL TERSGSGLEE  360
LIMSCTSADI KAETSIPHSQ ETDWLKYSSY WLPDSQDHHH HHHHHHHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-150	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr01613.1