PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01691.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 526aa MW: 58872.1 Da PI: 5.2548

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01691.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.5	2e-12	291	334	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ Lr+l+Pk +K++ a+iL A+eY+ +Lq Dr01691.1 291 VAERKRRKKLNDRLYALRSLVPKI-----TKMDRASILGDAIEYVMELQ 334 68*******************7.....7**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
DTSSSRQSVT LLKRPLPINI GFAENGKPSR RKGNSRTVLL EKENMTTVAE KIQSPFDSPL 60 NDAAKTRVLV PVQDGLVELF VAKQVKCFSH SHVCEDPYII GFVMSQCNNT SSYDHHHLHH 120 LGHQDQTQAM EDIDVGGVHD YTTKSTNNNP WLPPQPMSTD PSCFPWDNIS AENQSRICSS 180 PLDLFSGSKT STDIFFEGST SAIDSIVGNA NNNIQDMTAY HHQSHVIPTT TPSTRHRSVI 240 AESSVDKDLA KPDNSRQADS GDEEGSDQAA DDDDQRGIGR SGKRHHSKNL VAERKRRKKL 300 NDRLYALRSL VPKITKMDRA SILGDAIEYV MELQKQVKDL QDELEETNLE DEGAKQNSSN 360 MEMPQNPNNP MDEDDSPNSS RMMATNTKTV NNHEPVGHDD LNHQMEPQVE VKQLDEDEFY 420 VKVLCEQKIG GFTRLMEAVI SLGLEVTNVN VATYQSLVLN VFRVKKRENN NEAVQAEEVR 480 DSLLELTRNP NPNSNLNSNP TCGWMEGGGE QNQYNPHHML SYHGMN

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

DTSSSRQSVT LLKRPLPINI GFAENGKPSR RKGNSRTVLL EKENMTTVAE KIQSPFDSPL  60
NDAAKTRVLV PVQDGLVELF VAKQVKCFSH SHVCEDPYII GFVMSQCNNT SSYDHHHLHH  120
LGHQDQTQAM EDIDVGGVHD YTTKSTNNNP WLPPQPMSTD PSCFPWDNIS AENQSRICSS  180
PLDLFSGSKT STDIFFEGST SAIDSIVGNA NNNIQDMTAY HHQSHVIPTT TPSTRHRSVI  240
AESSVDKDLA KPDNSRQADS GDEEGSDQAA DDDDQRGIGR SGKRHHSKNL VAERKRRKKL  300
NDRLYALRSL VPKITKMDRA SILGDAIEYV MELQKQVKDL QDELEETNLE DEGAKQNSSN  360
MEMPQNPNNP MDEDDSPNSS RMMATNTKTV NNHEPVGHDD LNHQMEPQVE VKQLDEDEFY  420
VKVLCEQKIG GFTRLMEAVI SLGLEVTNVN VATYQSLVLN VFRVKKRENN NEAVQAEEVR  480
DSLLELTRNP NPNSNLNSNP TCGWMEGGGE QNQYNPHHML SYHGMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	300	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr01691.1