PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02010.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB

Protein Properties

Length: 290aa MW: 33009.8 Da PI: 6.3767

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWTteEde+lv++++++G g+W++ ++ g+ R++k+c++rw +yl Dr02010.1 14 RGRWTTEEDEKLVKYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	55.2	1.6e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE+e +v++++ lG++ W++Ia++++ gRt++++k++w+++l Dr02010.1 67 RGNISREEEEAIVKLHTTLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGRAPCCEKV GLKRGRWTTE EDEKLVKYIA EHGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SREEEEAIVK LHTTLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKLQRFN 120 DSDLILISDN EKLKKKSKSS NVKKIKRKDN KKPESLPSSS TTTTTTTSSS SSSSSLVQSE 180 SNINVLDQST ERSTGHEVVV PQEDQNGKMN NNSSEERECG SLVTSEESDN GVKEWGVGKW 240 LGINEDEVKS MNIDQLVDCW GMEFWDEPWM WDCGSDELLL QEQSVTNWLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	8e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr02010.1