PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02147.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 636aa    MW: 67664.5 Da    PI: 5.0248
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02147.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS449.22.7e-1372446291374
       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                lv++L++cA+av+++++++a+alL+++s la+++g +m+++a+yf++ALa r++r        ++p+++ + +s+ +   +  f+e++P+lkf+h+taNq
  Dr02147.1 244 LVHALMACADAVQQDNMKAADALLKQISVLAASQGGAMRKVASYFAQALAGRIYR--------IHPQQDCSLDSAFSDILQMHFYETCPYLKFAHFTANQ 335
                689****************************************************........66777765555666555566***************** PP

       GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp.. 198
                aIlea++g +rvH+iDf+++qG+QWpaLlqaLa Rp+gpps+R+Tg+g+p+++++++l+++g +La+fAe+++++fe++ +va++l+dle+ +L+ ++  
  Dr02147.1 336 AILEAFAGRRRVHVIDFSMKQGMQWPALLQALALRPGGPPSFRLTGIGPPQPDNTDALQQVGLKLAQFAETIHIDFEYHGFVANSLADLEPYMLDPNRtg 435
                **********************************************************************************************877777 PP

       GRAS 199 .........gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak............lpr 277
                          Ea+aVn+++ lhrll++++++e+    vL +v+ ++P++v+vveqea+hns++F++rf+eal+yys++fdsle +             + 
  Dr02147.1 436 gtvagadeePEAIAVNSIFDLHRLLASPGAIEK----VLGTVRAMRPRIVTVVEQEANHNSGPFVDRFTEALHYYSTMFDSLEGGacsgggsggaveSGX 531
                7888888889***********************....*********************************************9999999*9999977667 PP

       GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++++ +++++lg +i+nvvacegaer+erhetl +Wr+r+ +aGF+p++l+++a+kqa+ ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaWr
  Dr02147.1 532 GQQQDQLMSEVYLGHQICNVVACEGAERTERHETLTQWRSRMVRAGFEPAHLGSNAYKQASILLEFFAgGDGYRVEERDGCLTLGWHSRPLIATSAWR 629
                77***********************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    
MKREHQEIGG DGGGGGLTGM VGGGKGKIKE EDDEGVDELL AALGYKVRSS DMADVALKME  60
QLEMAMGSNA GAAPDDSLIA HLASDTVHYN PSDLSTWLET MLSELNTPPP PLPPAPADRH  120
LSYDLPPAPA PAVSVQSSIF DTIAPAESST ITTVDFSAPP PPSARPVTGP RVSYGPTETP  180
SDLTGTRERK RMRSSSASSS SSRGGGVAGI GSVNTTTTEA SSISPAAPGP XVVIVDSQEA  240
GIRLVHALMA CADAVQQDNM KAADALLKQI SVLAASQGGA MRKVASYFAQ ALAGRIYRIH  300
PQQDCSLDSA FSDILQMHFY ETCPYLKFAH FTANQAILEA FAGRRRVHVI DFSMKQGMQW  360
PALLQALALR PGGPPSFRLT GIGPPQPDNT DALQQVGLKL AQFAETIHID FEYHGFVANS  420
LADLEPYMLD PNRTGGTVAG ADEEPEAIAV NSIFDLHRLL ASPGAIEKVL GTVRAMRPRI  480
VTVVEQEANH NSGPFVDRFT EALHYYSTMF DSLEGGACSG GGSGGAVESG XGQQQDQLMS  540
EVYLGHQICN VVACEGAERT ERHETLTQWR SRMVRAGFEP AHLGSNAYKQ ASILLEFFAG  600
GDGYRVEERD GCLTLGWHSR PLIATSAWRL ADAAAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein