PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02206.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 361aa MW: 40124.7 Da PI: 8.3627

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02206.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2e-33	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl Dr02206.1 31 KPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 85 79****************************************************8 PP
2	Myb_DNA-binding	70.8	2.2e-22	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e+++++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ Dr02206.1 33 RLRWTVELHDRFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 84 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MFHSKKPTMN SHERPMCVQG DSGLVLTTDP KPRLRWTVEL HDRFVDAVTQ LGGPDKATPK 60 TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNDHSVKD ATALELQRNM ASSSSMMGRT 120 MNENVHITEA IRMQMEVQRR LHEQLEVQKH LQMRIEAQGK YMQSILEKAC QTLAGENSMA 180 GGGSPYKGLG HQGVVDINNL KDLGSPLSFP SLQDLHLFGS TDHLDMHQHA SLDGFLQTSD 240 TSICIGKKRP NPYLSNGKSP MIWTDDLRLQ ELGSGSTCMG SQEEPSKSDQ LQIAPSVMDS 300 GIDMDSITDV YETKPMISGD SSGEKKFEGS SKLERPSPRR VPLNPMIRGG TLSHTRNISH 360 G

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MFHSKKPTMN SHERPMCVQG DSGLVLTTDP KPRLRWTVEL HDRFVDAVTQ LGGPDKATPK  60
TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNDHSVKD ATALELQRNM ASSSSMMGRT  120
MNENVHITEA IRMQMEVQRR LHEQLEVQKH LQMRIEAQGK YMQSILEKAC QTLAGENSMA  180
GGGSPYKGLG HQGVVDINNL KDLGSPLSFP SLQDLHLFGS TDHLDMHQHA SLDGFLQTSD  240
TSICIGKKRP NPYLSNGKSP MIWTDDLRLQ ELGSGSTCMG SQEEPSKSDQ LQIAPSVMDS  300
GIDMDSITDV YETKPMISGD SSGEKKFEGS SKLERPSPRR VPLNPMIRGG TLSHTRNISH  360
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-116	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr02206.1