PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02315.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 433aa MW: 47455.8 Da PI: 7.8182

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02315.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.6	6.4e-39	97	156	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k l+cprC+s++tkfCyynny+++qPryfCk+C+ryWt+GG++rnvPvG+grrk+k++ Dr02315.1 97 PDKLLPCPRCNSMDTKFCYYNNYNVNQPRYFCKNCQRYWTAGGTMRNVPVGAGRRKSKHA 156 78999****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MSEVKDPALK LFGMSITLPE KDTCGVMAKT EVDKLMSGSP NGLDKSGQDS SMCSEKNSEH 60 EHQPSNSSDI EMKNYEEAEQ DLIKNSASGQ AKVLKKPDKL LPCPRCNSMD TKFCYYNNYN 120 VNQPRYFCKN CQRYWTAGGT MRNVPVGAGR RKSKHACSQY RLCSQKEVGN SVPVMKFSQE 180 GPLCESMASV LNLNEKRSSE IGPLSCGETT EETSTSSSMT ALNCSENEVK ESIGCINKNG 240 IESCYNGVTP MQCYHPGTPW AYAWASMATN RCPPALACKL ENGISNPSSE VSWRPPPMII 300 APAFCAPTIP FPMIPPSVWN VPWLRPGGNV SPLPSPTLGK HSRDHSMQSE EENEKSLWVP 360 KTLRIDDPGA AARSSIWSAL GIKPEEEMKK GGGIFKGFKS RTENTKVKTP EAAQAMHVNP 420 AALSRSQAFQ EST

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MSEVKDPALK LFGMSITLPE KDTCGVMAKT EVDKLMSGSP NGLDKSGQDS SMCSEKNSEH  60
EHQPSNSSDI EMKNYEEAEQ DLIKNSASGQ AKVLKKPDKL LPCPRCNSMD TKFCYYNNYN  120
VNQPRYFCKN CQRYWTAGGT MRNVPVGAGR RKSKHACSQY RLCSQKEVGN SVPVMKFSQE  180
GPLCESMASV LNLNEKRSSE IGPLSCGETT EETSTSSSMT ALNCSENEVK ESIGCINKNG  240
IESCYNGVTP MQCYHPGTPW AYAWASMATN RCPPALACKL ENGISNPSSE VSWRPPPMII  300
APAFCAPTIP FPMIPPSVWN VPWLRPGGNV SPLPSPTLGK HSRDHSMQSE EENEKSLWVP  360
KTLRIDDPGA AARSSIWSAL GIKPEEEMKK GGGIFKGFKS RTENTKVKTP EAAQAMHVNP  420
AALSRSQAFQ EST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-71	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr02315.1