PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02419.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family S1Fa-like
Protein Properties Length: 111aa    MW: 12428.8 Da    PI: 12.0345
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02419.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA123.66.7e-3947111569
       S1FA   5 kveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPG 69 
                + eakG+nPGl+vllvvgg+ll+flvgny+ly yaqk+lPP+kkkPvskkk+k+  lkqGv++PG
  Dr02419.1  47 RKEAKGFNPGLVVLLVVGGFLLLFLVGNYALYAYAQKTLPPKKKKPVSKKKMKKAMLKQGVSAPG 111
                68**************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MRVLRSLASR NPPGETHKSL SISRSREEER GFGRRIFQNG QPVHRRRKEA KGFNPGLVVL  60
LVVGGFLLLF LVGNYALYAY AQKTLPPKKK KPVSKKKMKK AMLKQGVSAP G