PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02456.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 491aa MW: 54798.7 Da PI: 7.2409

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02456.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.3	3.2e-33	176	233	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ d++++ei+Y+g+Hnh+k Dr02456.1 176 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERAL-DGQITEIVYKGTHNHPK 233 7**************************************.*************85 PP
2	WRKY	106	2e-33	330	388	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++d ++v++tYeg+Hnh+ Dr02456.1 330 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSNGCPVRKHVERASHDLRAVITTYEGKHNHD 388 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MASSSKGSLD SSQNSFSFSD LLSGDIDTGN DNRMRLSSSH GFSDHTETFL PKFKSITPPS 60 LPLSPPPISP SYFSIPAGLS PAELLDSPVL LSSTFLQSPT SGSYLYPQGI KDEEAKPYSD 120 FSFHVQKPSN MQSFQPSSSS SEHQQQVWNS SXIKSEGLSM PSNYSNPNTL KQRRSEDGYN 180 WRKYGQKQVK GSENPRSYYK CTYPNCPTKK KVERALDGQI TEIVYKGTHN HPKPQPARRD 240 SLSSQALQAS NSQHEASDHS FGGTPDNSSA SFGDDDVDPC KPDGDELDRE EPDAKRWKSE 300 GDNESVSVSG NRTVREPRVV VQTTSDIDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTSNG 360 CPVRKHVERA SHDLRAVITT YEGKHNHDVP AARGSAGNLN NNNITMAIRP SAMASHTTNN 420 AMNARPSSSS QSQAPFTLQM VQNQVYENSS SMAYYMSQQQ QHQHQEQRVQ MENMLSRTKD 480 EPREDFFSWL N

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MASSSKGSLD SSQNSFSFSD LLSGDIDTGN DNRMRLSSSH GFSDHTETFL PKFKSITPPS  60
LPLSPPPISP SYFSIPAGLS PAELLDSPVL LSSTFLQSPT SGSYLYPQGI KDEEAKPYSD  120
FSFHVQKPSN MQSFQPSSSS SEHQQQVWNS SXIKSEGLSM PSNYSNPNTL KQRRSEDGYN  180
WRKYGQKQVK GSENPRSYYK CTYPNCPTKK KVERALDGQI TEIVYKGTHN HPKPQPARRD  240
SLSSQALQAS NSQHEASDHS FGGTPDNSSA SFGDDDVDPC KPDGDELDRE EPDAKRWKSE  300
GDNESVSVSG NRTVREPRVV VQTTSDIDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTSNG  360
CPVRKHVERA SHDLRAVITT YEGKHNHDVP AARGSAGNLN NNNITMAIRP SAMASHTTNN  420
AMNARPSSSS QSQAPFTLQM VQNQVYENSS SMAYYMSQQQ QHQHQEQRVQ MENMLSRTKD  480
EPREDFFSWL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-106	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr02456.1