PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02553.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ERF

Protein Properties

Length: 157aa MW: 17863 Da PI: 4.9914

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02553.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22	4.1e-07	55	92	7	48
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 r+++ gr++ eIr ps+ +k ++lg+f+t++e a a++ Dr02553.1 55 RRRP-CGRYAKEIRNPST---KKGHWLGTFDTPKEVALAYDM 92 5667.7999999999855...5******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MEKNPVDGRV DGLVESSLLV VQGFPHPAVN NALLQYFATV SVLNSFLNPY FHRGRRRPCG 60 RYAKEIRNPS TKKGHWLGTF DTPKEVALAY DMSSITFRGI DKAQTNFCYE FLTMPSPPPP 120 PLPQSPLPSE KEKEYYYESN LEINDDHDHL VDSDDDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13910.1	3e-19	ERF family protein

Link Out ? help Back to Top
Ensembl	Dr02553.1