PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02569.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 122aa    MW: 14032 Da    PI: 8.1987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02569.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.9e-1559107355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y GV  ++ +gr++AeIr ps+   +kr++lg+f+t+e+Aa a++     ++g
  Dr02569.1  59 YLGVQKRP-WGRYAAEIRNPSI---KKRHWLGTFDTPEKAALAYDMSXITFRG 107
                88**9999.**********965...6*******************87666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MEDEKRSKET TKYENGYFDV LGLCCTLEDS LIEEILKPLK GVQKIEVIAH LENQASTEYL  60
GVQKRPWGRY AAEIRNPSIK KRHWLGTFDT PEKAALAYDM SXITFRGRLV PGNVKTLPPI  120
MW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-23ERF family protein