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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr02618.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 164aa MW: 18323.4 Da PI: 5.9468 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 13.3 | 0.00025 | 32 | 54 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C++ F++ L H++ H
Dr02618.1 32 YECMFCKRGFTTAQALGGHMNIH 54
99*******************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 164 aa Download sequence |
MEGGKKSETK VSSDEAESAE QVNDDAGTGR SYECMFCKRG FTTAQALGGH MNIHRKDRAK 60 MRQPPTNLAK KTEFSGYAHH QQSYMNQMPL YPYPLFNFTC SASSSLGKDE GVRRPQELSL 120 FNKDVPLSLS MRFDGGGLED GGEKMKEGEE EVDLELRLGQ HHEP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G53820.1 | 4e-15 | C2H2 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr02618.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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