PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02619.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family C2H2
Protein Properties Length: 191aa    MW: 21243.4 Da    PI: 7.8042
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02619.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.6e-054466123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               y+C+ C++ F++   L  H+++H
  Dr02619.1 44 YTCSFCHREFRSAQALGGHMNVH 66
               9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MERFETSSRD RDQCGNKVKE IWSHGCPSLS GGLLGGFSWP PRLYTCSFCH REFRSAQALG  60
GHMNVHRRDR ALLRHSSPWD PSCLTKPRPD LNLIPPPNPN PNPNSVNFSP HCHAASSKAC  120
AYTFPSLFSP LKSFTSSSSS SASSMEALQG SRPVKPXFRV GEXKSFFDMD IEMYATDIDD  180
DLDLELRLGP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.14e-15C2H2 family protein