PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02793.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 305aa    MW: 33659.4 Da    PI: 5.0524
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02793.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.31.1e-2131301128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkr.knratksgyWkatgkdkevlskk 96 
                lp+G+rF+P++ el+ +yL  kv+g + + +  ik+  d y + P  L +  + + ++ +++ F++ + ++  g r + r+t +g Wkat   +++ +k 
  Dr02793.1   3 LPRGCRFDPNEFELI-QYLSDKVNGCPDPGQGLIKDDiDAYASSPDLLSAnfCPDDGDGRLFCFTPIKFRK--GLRcRDRSTPDGHWKATBARRRIDDKV 99 
                799************.9**********99988887666**********85234444555778887776554..444155799****************** PP

        NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                g+ vg+ +tL +y   ++  ++++W+m+ey+l
  Dr02793.1 100 GNPVGCVQTLSYYL-XKRGVVRSKWIMKEYTL 130
                *************5.555558*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MRLPRGCRFD PNEFELIQYL SDKVNGCPDP GQGLIKDDID AYASSPDLLS ANFCPDDGDG  60
RLFCFTPIKF RKGLRCRDRS TPDGHWKATB ARRRIDDKVG NPVGCVQTLS YYLXKRGVVR  120
SKWIMKEYTL PNCQNVGLCV IYSSLNRYKK SNKERDSCLK PIQNQSSLSY NASSKDDVSN  180
FRSSQGSPST HGVSXSYSSA VGACSGSVNI DGTGGAGLID DHLFLDPSWE EFISFSGHNV  240
LSAAKLPCLX DNGWPDGGDT DIFKLEDVAG PNNWPDLLLE EVDSPKLDLE LCNSDIYGTK  300
PDSKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.13e-13NAC family protein