PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02898.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB

Protein Properties

Length: 238aa MW: 28181.1 Da PI: 7.2142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02898.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.9e-19	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll+d v+++G g+W+++++ g++R++k+c++rw +yl Dr02898.1 16 KGPWTPQEDKLLIDHVNLHGEGRWNSVSKLTGLRRSGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.7e-17	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ Dr02898.1 69 RGKITPQEENIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 113 8999****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MNVQFGWGTF EDGWRKGPWT PQEDKLLIDH VNLHGEGRWN SVSKLTGLRR SGKSCRLRWV 60 NYLRPDLKRG KITPQEENII LELHARWGNR WSTIARSLPG RTDNEIKNYW RTHFKKGKTS 120 KNVERARARF LKQQQEQQQQ QQQQQEFVLQ VQVDQEQQQQ VQQQVLHQYN CYDQQTNEVQ 180 HVGEQDIDEM IMAYMYPNMS SSMTSMSDGS SEDIGSSLGN XWNLDDVVQQ HDQVLYFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	5e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr02898.1