PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02949.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 461aa    MW: 51729.5 Da    PI: 5.1178
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02949.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.60.00025270289625
                HHHHHHHHHHHHHHHHHHHC CS
        HLH   6 nerErrRRdriNsafeeLre 25 
                 + Er+RR+++N+++  L+ 
  Dr02949.1 270 FATERQRREQLNEKYKALKA 289
                689***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
MYSHASGYFD HCQESSQAHQ EPLIIGVESD HPSLDHQNNN INNDLEDNMK ISNFSLEDLS  60
NPHNNDDNNN NNNSGDPPGM GLDQLQHQLG FDIEHELHSH LIQEAHPLDS STDWNTTMQD  120
IQNMSDQQPN MQCYDHTSTY PVPDLLNLLQ LPRCSSMAAS MSFSKPGSFP LDVFGELPGT  180
AESGSVLYDS SLHLGYPTPP QTNLLRDLFQ SLPQNYGLFG GIDERDHVGG VAGGGGGTVF  240
QEMDGRQYDN TVIDYRKEII GNKGEVKGNF ATERQRREQL NEKYKALKAS IVGDAIEYIN  300
ELRRTLSELK ILVEKKRHGR ERRKMVRTTD VEEVAGDMES SSMRPLRDEH DHHPLNGALR  360
SSWLQRKSKD SFVDVRIVDD EVNIKLSQKK KVNCLLFVAK ALDELQLNLI HVSGGNIGEH  420
YIFMLNTKIS EGSSVYAGAV AKKLLEVMDR QYTTATFPSG F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.15e-68bHLH family protein