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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr03000.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 159aa MW: 18042.2 Da PI: 9.2585 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 15.1 | 6.5e-05 | 53 | 75 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C + F++ L H+++H
Dr03000.1 53 YTCTFCRREFRSAQALGGHMNVH 75
9********************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 159 aa Download sequence |
MTQLQKQRPE KNIAGKWRWP RRRTGEEDES WEVKAFAEDT NSALGTTWPP RSYTCTFCRR 60 EFRSAQALGG HMNVHRRDRA KLRQSFQASE QSSPVMFKPP EFVVKGDHGA FHSMSFFYSF 120 PVIAQSPVTG KRSETSESGD GSGGAVVEEG LDLELRLGW |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17810.1 | 8e-31 | C2H2 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr03000.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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